RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 THNSL2Q86YJ6 484 aa11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 ZNF439Q8NDP4 499 aa11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 TSPAN14Q8NG11 270 aa11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 R3HDM4Q96D70 268 aa11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 KCTD7Q96MP8 289 aa11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 CMSS1Q9BQ75 279 aaKnown RBP11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 RIMS4Q9H426 269 aaPredicted RBP11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 RNF167Q9H6Y7 350 aa11.21□□□□□ -0.61
CCHCR1-211ENST00000467553 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.62
CCHCR1-211ENST00000467553 A0A075B6Q4 140 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 A0A087WXM4 84 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 SH2D7A6NKC9 451 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 FOXI3A8MTJ6 420 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 NOTOA8MTQ0 251 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 OR2F2O95006 317 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 TNFAIP8O95379 198 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 CD28P10747 220 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 TMEM11P17152 192 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 HTD2P86397 168 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 MXD1Q05195 221 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 ZNF816Q0VGE8 651 aaPredicted RBP11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 HMGN3Q15651 99 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 PLAC9Q5JTB6 97 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 HIST2H2BDQ6DRA6 164 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 ZNF880Q6PDB4 577 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 LYG1Q8N1E2 194 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 WFDC9Q8NEX5 89 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 RAB3CQ96E17 227 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 DAPK2Q9UIK4 370 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 JPT1Q9UK76 154 aa11.2□□□□□ -0.62
CCHCR1-211ENST00000467553 METTL21EPA6NDL7 271 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 YPEL1O60688 119 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 RGS11O94810 467 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 LPLP06858 475 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 CD3GP09693 182 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 CLEC2LP0C7M8 214 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 RAB6AP20340 208 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 SDC2P34741 201 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 MRPS15P82914 257 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 STEAP3Q658P3 488 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 Q6ZPA2 131 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 MOB1BQ7L9L4 216 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 TGIF2LXQ8IUE1 241 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 OR10R2Q8NGX6 335 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 RTN4IP1Q8WWV3 396 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 ST6GALNAC6Q969X2 333 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 YPEL2Q96QA6 119 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 CITED2Q99967 270 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 ATG5Q9H1Y0 275 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
CCHCR1-211ENST00000467553 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 GNB3P16520 340 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 CD83Q01151 205 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 TMEM95Q3KNT9 176 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 CENPOQ9BU64 300 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 ABHD14AQ9BUJ0 271 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 Q9N2K0 584 aa11.18□□□□□ -0.62
CCHCR1-211ENST00000467553 NCBP2LA6PVI3 153 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 ADARB2-AS1A8MUL3 147 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 ZNF736B4DX44 427 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 M0QZK8 103 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 RAB27BO00194 218 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 HSPA12AO43301 675 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 AMY1AP04745 511 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 AMY2AP04746 511 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 SCTP09683 121 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 SNRPBP14678 240 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 CEACAM6P40199 344 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 CENPVQ7Z7K6 275 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 OR2AK2Q8NG84 335 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 OR2T10Q8NGZ9 312 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 RBMXL1Q96E39 390 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 EAF1Q96JC9 268 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 SLC23A1Q9UHI7 598 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 MGAT4AQ9UM21 535 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 KCNK7Q9Y2U2 307 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 MOB4Q9Y3A3 225 aa11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 TSSC4Q9Y5U2 329 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-211ENST00000467553 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 CD33P20138 364 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 CD1BP29016 333 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 ARFRP1Q13795 201 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 EBI3Q14213 229 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 IDNKQ5T6J7 187 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 MRAPQ8TCY5 172 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 PTX4Q96A99 478 aa11.16□□□□□ -0.62
CCHCR1-211ENST00000467553 TRDCB7Z8K6 153 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 TXNL1O43396 289 aa11.15□□□□□ -0.62
CCHCR1-211ENST00000467553 LANCL1O43813 399 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms