RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 OR51H1Q8NH63 302 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 ZNRF2Q8NHG8 242 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 CD200R1Q8TD46 325 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 CT55Q8WUE5 264 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 ROPN1LQ96C74 230 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 NEURL3Q96EH8 262 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 PHYHIPLQ96FC7 376 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 BMFQ96LC9 184 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 YPEL4Q96NS1 127 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 HSD17B10Q99714 261 aaKnown RBP2.64□□□□□ -1.99
VPS50-209ENST00000467326 TMEM243Q9BU79 118 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 MS4A8Q9BY19 250 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 SH3BGRL3Q9H299 93 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 SLCO1B3Q9NPD5 702 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 PRTFDC1Q9NRG1 225 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 CCL28Q9NRJ3 127 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 MRPL27Q9P0M9 148 aaKnown RBP2.64□□□□□ -1.99
VPS50-209ENST00000467326 SSR3Q9UNL2 185 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 POMPQ9Y244 141 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 PKIGQ9Y2B9 76 aa2.64□□□□□ -1.99
VPS50-209ENST00000467326 PTPRKQ15262 1439 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 IGHV6-1A0A0B4J1U7 121 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 WI2-2373I1.2A0A1W2PRP0 233 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 hADV38S2A0JD32 116 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 MYBPHLA2RUH7 354 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 FAM25AB3EWG3 89 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 FAM25CB3EWG5 89 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 FAM25GB3EWG6 89 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 ATP6V1G2-DDX39BF2Z307 99 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 M0R1X1 148 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 SLC22A1O15245 554 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 TPST1O60507 370 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 CDRT1O95170 752 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 GADD45GO95257 159 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 NDUFC2O95298 119 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 CCNE2O96020 404 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 RBP1P09455 135 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 TFPTP0C1Z6 253 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 OR12D1P0DN82 309 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 SPI1P17947 270 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 CA5AP35218 305 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 AKR1C3P42330 323 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 MAP2K4P45985 399 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 CCR6P51684 374 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 ZNF133P52736 654 aaPredicted RBP2.63□□□□□ -1.99
VPS50-209ENST00000467326 GNG2P59768 71 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 RPL23P62829 140 aaKnown RBP2.63□□□□□ -1.99
VPS50-209ENST00000467326 DEFA6Q01524 100 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 PNOCQ13519 176 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 RBMY1FQ15415 496 aaKnown RBP2.63□□□□□ -1.99
VPS50-209ENST00000467326 GUCA2BQ16661 112 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 FAM222AQ5U5X8 452 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 KDM4DQ6B0I6 523 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 CYB5R2Q6BCY4 276 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 FBXW12Q6X9E4 464 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 VN1R4Q7Z5H5 301 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 OR11H6Q8NGC7 330 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 ORAOV1Q8WV07 137 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 FAM151AQ8WW52 585 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 C1orf54Q8WWF1 131 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 DNAJC30Q96LL9 226 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 PPP1R2P1Q96PQ5 205 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 SPACA5Q96QH8 159 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 LINC01587Q99440 93 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 NRIP2Q9BQI9 281 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 PRSS27Q9BQR3 290 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 CCDC32Q9BV29 185 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 RSPO3Q9BXY4 272 aaPredicted RBP2.63□□□□□ -1.99
VPS50-209ENST00000467326 GNB1LQ9BYB4 327 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 TPT1P8Q9HAU6 139 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 PDFQ9HBH1 243 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 LRTM1Q9HBL6 345 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 MMP26Q9NRE1 261 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 ACER3Q9NUN7 267 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 C14orf105Q9NVL8 296 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 RASL12Q9NYN1 266 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 COPZ2Q9P299 210 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 SS18L2Q9UHA2 77 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 PRO0461Q9UI25 63 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 PRNDQ9UKY0 176 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 GRIN2BQ13224 1484 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 NFASCO94856 1347 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 ZNF646O15015 1829 aaPredicted RBP2.63□□□□□ -1.99
VPS50-209ENST00000467326 CAMTA1Q9Y6Y1 1673 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 MYO15BQ96JP2 1530 aa2.63□□□□□ -1.99
VPS50-209ENST00000467326 RFX7Q2KHR2 1363 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 KIF15Q9NS87 1388 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 CEP152O94986 1710 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 NPATQ14207 1427 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 PDS5BQ9NTI5 1447 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 IGKV1-8A0A0C4DH67 115 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 A0A0X1KG70 313 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 TRAPPC13A5PLN9 417 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 ZNF705GA8MUZ8 300 aaPredicted RBP2.62□□□□□ -1.99
VPS50-209ENST00000467326 H7C1C5 153 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 UPK1AO00322 258 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 FFAR1O14842 300 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 TCF21O43680 179 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 MFSD11O43934 449 aa2.62□□□□□ -1.99
VPS50-209ENST00000467326 SS18L1O75177 396 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms