RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CDX1P47902 265 aaPredicted RBP13.76□□□□□ -0.21
COL7A1-206ENST00000466591 HTD2P86397 168 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 SPHARQ15513 63 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 C9orf66Q5T8R8 295 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 OGFRL1Q5TC84 451 aaPredicted RBP13.76□□□□□ -0.21
COL7A1-206ENST00000466591 OR10K2Q6IF99 312 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 C6orf201Q7Z4U5 140 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 GAPTQ8N292 157 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 FAM71E2Q8N5Q1 922 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 PHYHIPQ92561 330 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 P2RX4Q99571 388 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 URM1Q9BTM9 101 aaKnown RBP13.76□□□□□ -0.21
COL7A1-206ENST00000466591 FAAP24Q9BTP7 215 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
COL7A1-206ENST00000466591 MBNL3Q9NUK0 354 aaKnown RBP13.76□□□□□ -0.21
COL7A1-206ENST00000466591 WSB1Q9Y6I7 421 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 HSPA12AO43301 675 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 YPEL1O60688 119 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 BLVRBP30043 206 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-206ENST00000466591 INSL4Q14641 139 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 KIR2DS1Q14954 304 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 SIGIRRQ6IA17 410 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 C4orf3Q8WVX3 66 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 YPEL2Q96QA6 119 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 SULT4A1Q9BR01 284 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 CCDC90BQ9GZT6 254 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 PLSCR3Q9NRY6 295 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 PIPOXQ9P0Z9 390 aa13.75□□□□□ -0.21
COL7A1-206ENST00000466591 H7C2Y5 167 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 NBR2O15453 112 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 IGHG4P01861 327 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 GSTP1P09211 210 aaKnown RBP13.74□□□□□ -0.21
COL7A1-206ENST00000466591 SRMP19623 302 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 CHATP28329 748 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 RPS27AP62979 156 aaKnown RBP13.74□□□□□ -0.21
COL7A1-206ENST00000466591 MRPS15P82914 257 aaKnown RBP13.74□□□□□ -0.21
COL7A1-206ENST00000466591 FAM27D1Q5T7N8 215 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 LIN54Q6MZP7 749 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 MOB1BQ7L9L4 216 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 TMEM203Q969S6 136 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 RBMXL1Q96E39 390 aaKnown RBP13.74□□□□□ -0.21
COL7A1-206ENST00000466591 CHCHD6Q9BRQ6 235 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 TPRKBQ9Y3C4 175 aa13.74□□□□□ -0.21
COL7A1-206ENST00000466591 SAA2-SAA4A0A096LPE2 208 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 CASQ2O14958 399 aaPredicted RBP13.73□□□□□ -0.21
COL7A1-206ENST00000466591 ST8SIA5O15466 376 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 LY86O95711 162 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 BPNT1O95861 308 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 IGF1P05019 195 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 SAA2P0DJI9 122 aaPredicted RBP13.73□□□□□ -0.21
COL7A1-206ENST00000466591 VSIG8P0DPA2 414 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 ECI1P42126 302 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 RANBP1P43487 201 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 OR3A3P47888 321 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
COL7A1-206ENST00000466591 ECSCRQ19T08 205 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 LIPKQ5VXJ0 399 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 OR5B12Q96R08 314 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 NABP2Q9BQ15 211 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 OR51J1Q9H342 316 aa13.73□□□□□ -0.21
COL7A1-206ENST00000466591 TRAV41A0A0B4J266 112 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 RAB29O14966 203 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 ATP6V0E1O15342 81 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 ARL6IP5O75915 188 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 ARSBP15848 533 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 CD40LGP29965 261 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 HMGN3Q15651 99 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 C6orf141Q5SZD1 244 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 LAIR2Q6ISS4 152 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 C11orf87Q6NUJ2 197 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 ZNF833PQ6ZTB9 187 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 FBLIM1Q8WUP2 373 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 B9D2Q9BPU9 175 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 ANKRD60Q9BZ19 345 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 RIMS4Q9H426 269 aaPredicted RBP13.72□□□□□ -0.21
COL7A1-206ENST00000466591 KCNK15Q9H427 330 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 A3GALT2U3KPV4 340 aa13.72□□□□□ -0.21
COL7A1-206ENST00000466591 HLA-DRB1P01911 266 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 OR8U8P0C7N1 319 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 P2RY14Q15391 338 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 TRAM1Q15629 374 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 C5orf64Q2M2E5 130 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 ZNF260Q3ZCT1 412 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 C1orf100Q5SVJ3 147 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 RNLSQ5VYX0 342 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 FAM131AQ6UXB0 335 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 LRRTM1Q86UE6 522 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 SVOPQ8N4V2 548 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 EDARADDQ8WWZ3 215 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 NICN1Q9BSH3 213 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 MGAT4AQ9UM21 535 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 VSIG4Q9Y279 399 aa13.71□□□□□ -0.21
COL7A1-206ENST00000466591 OR5H14A6NHG9 310 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 ANKRD65E5RJM6 399 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms