RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
HMGXB4-206ENST00000466438 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
HMGXB4-206ENST00000466438 SRRQ9GZT4 340 aa11.5□□□□□ -0.57
HMGXB4-206ENST00000466438 ATG5Q9H1Y0 275 aa11.5□□□□□ -0.57
HMGXB4-206ENST00000466438 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
HMGXB4-206ENST00000466438 XRCC3O43542 346 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 CRTAPO75718 401 aaPredicted RBP11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 UPK1BO75841 260 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 RPLP1P05386 114 aaKnown RBP11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 GP9P14770 177 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 SERPINA2P20848 420 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 PRDX2P32119 198 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 HAAOP46952 286 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 CDX1P47902 265 aaPredicted RBP11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 ZNF79Q15937 498 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 SLC22A6Q4U2R8 563 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 ZNF429Q86V71 674 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 DRAM1Q8N682 238 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 MRPS24Q96EL2 167 aaKnown RBP11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 ZNF714Q96N38 554 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 SOSTQ9BQB4 213 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 CLEC7AQ9BXN2 247 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 PKIBQ9C010 78 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 POLDIP2Q9Y2S7 368 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 SESN1Q9Y6P5 492 aa11.49□□□□□ -0.57
HMGXB4-206ENST00000466438 KMT2AQ03164 3969 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 IGKV1-27A0A075B6S5 117 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 MEX3AA1L020 520 aaKnown RBP11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 J3QT63 122 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 CTDSPLO15194 276 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 LY6G6CO95867 125 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 IFNA6P05013 189 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 GTF2F2P13984 249 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 SPNP16150 400 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 CDK2P24941 298 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 INPP1P49441 399 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 DEFA1P59665 94 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 DEFA3P59666 94 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 QRFPP83859 136 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 UNC119Q13432 240 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 ARL6IP1Q15041 203 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 OR8H2Q8N162 312 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 Q8N402 240 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 OR56B1Q8NGI3 324 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 OR51I2Q9H344 312 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 KCNK15Q9H427 330 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 RHOFQ9HBH0 211 aa11.48□□□□□ -0.57
HMGXB4-206ENST00000466438 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 MGMTP16455 207 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 TAS2R20P59543 309 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 RPS27AP62979 156 aaKnown RBP11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 IL24Q13007 206 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 HACD4Q5VWC8 232 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 SLC25A26Q70HW3 274 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 Q8IYB0 196 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 STPG2Q8N412 459 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 AQP3Q92482 292 aa11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 MRPS7Q9Y2R9 242 aaKnown RBP11.47□□□□□ -0.57
HMGXB4-206ENST00000466438 A8MZ25 164 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 HTR3BO95264 441 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 MPZP25189 248 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 SCN1BQ07699 218 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 CXorf66Q5JRM2 361 aaPredicted RBP11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 OR10K2Q6IF99 312 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 HAGHLQ6PII5 290 aaPredicted RBP11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 TCF23Q7RTU1 214 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 SNX29P2Q8IUI4 249 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 FOXRED2Q8IWF2 684 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 POC1AQ8NBT0 407 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 OR51T1Q8NGJ9 327 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 C4orf3Q8WVX3 66 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 TM2D1Q9BX74 207 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 SELENOIQ9C0D9 397 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 C19orf73Q9NVV2 129 aa11.46□□□□□ -0.57
HMGXB4-206ENST00000466438 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 LEUTXA8MZ59 168 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 GABARAPH6UMI1 98 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 K7N7A8 449 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 GSTZ1O43708 216 aaPredicted RBP11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 IGHG2P01859 326 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 IL7P13232 177 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 EDDM3BP56851 147 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 PLA2G7Q13093 441 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 MADCAM1Q13477 382 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 SRSF7Q16629 238 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 LINC00596Q86U02 117 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 IZUMO1Q8IYV9 350 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 RNF152Q8N8N0 203 aa11.45□□□□□ -0.58
HMGXB4-206ENST00000466438 TMEM104Q8NE00 496 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms