RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 MTCP1P56278 107 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 PPP3R1P63098 170 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
CXCR4-203ENST00000466288 FAM220AQ7Z4H9 259 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 MOB3BQ86TA1 216 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 Q8N1Y9 231 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 CHST4Q8NCG5 386 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 OR10X1Q8NGY0 326 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 OR2T10Q8NGZ9 312 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 S1PR3Q99500 378 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 C19orf73Q9NVV2 129 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF580Q9UK33 172 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 VSIG4Q9Y279 399 aa11.19□□□□□ -0.62
CXCR4-203ENST00000466288 A8MZ25 164 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 J3QRK9 145 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 KDM4BO94953 1096 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 MYL9P24844 172 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
CXCR4-203ENST00000466288 SDC2P34741 201 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 GLP1RP43220 463 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 CDK5R1Q15078 307 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 LTC4SQ16873 150 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 TMEM91Q6ZNR0 172 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 SSX6Q7RTT6 188 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 PARP16Q8N5Y8 322 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF565Q8N9K5 539 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 TMEM104Q8NE00 496 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 CCDC54Q8NEL0 328 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 OR51T1Q8NGJ9 327 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 PP6455Q8WZ26 134 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
CXCR4-203ENST00000466288 PELI1Q96FA3 418 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 OR5B12Q96R08 314 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 TBX5Q99593 518 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 RASL11BQ9BPW5 248 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 BARHL1Q9BZE3 327 aa11.18□□□□□ -0.62
CXCR4-203ENST00000466288 A0A1W2PPE3 182 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 GAPDHP04406 335 aaKnown RBP11.17□□□□□ -0.62
CXCR4-203ENST00000466288 KRT8P05787 483 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 TNFSF8P32971 234 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 DEFA1P59665 94 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 DEFA3P59666 94 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 LHFPL2Q6ZUX7 228 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 SETD6Q8TBK2 473 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 RFT1Q96AA3 541 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 ADAT3Q96EY9 351 aaPredicted RBP11.17□□□□□ -0.62
CXCR4-203ENST00000466288 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 NCOR1P1Q9H4R4 102 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 RABL2AQ9UBK7 228 aaPredicted RBP11.17□□□□□ -0.62
CXCR4-203ENST00000466288 KIF25Q9UIL4 384 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 RABL2BQ9UNT1 228 aa11.17□□□□□ -0.62
CXCR4-203ENST00000466288 DEGS1O15121 323 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 OR5H8P0DN80 308 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 ATF1P18846 271 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 PRKACBP22694 351 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 MAPK3P27361 379 aaPredicted RBP11.16□□□□□ -0.62
CXCR4-203ENST00000466288 ZP1P60852 638 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 OXA1LQ15070 435 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 TRIM16LQ309B1 348 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 ACSM6Q6P461 480 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 FDX2Q6P4F2 183 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 PRSS35Q8N3Z0 413 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 YIPF7Q8N8F6 280 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 GDPD1Q8N9F7 314 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 RFESDQ8TAC1 157 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 GHSRQ92847 366 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
CXCR4-203ENST00000466288 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
CXCR4-203ENST00000466288 MEIKINA0A087WXM9 373 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 LOC107986453A0A1B0GWG9 222 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 ZNF736B4DX44 427 aaPredicted RBP11.15□□□□□ -0.62
CXCR4-203ENST00000466288 CTDSP2O14595 271 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 RGS5O15539 181 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 MOSP00540 346 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 CD1BP29016 333 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 SSTR5P35346 364 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 SLURP1P55000 103 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 F2RL1P55085 397 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 ACSM3Q53FZ2 586 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 TMEM65Q6PI78 240 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 UTS2BQ765I0 119 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 LYPD6Q86Y78 171 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 RDH10Q8IZV5 341 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 CENPSQ8N2Z9 138 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 OR10A7Q8NGE5 316 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 OR8H1Q8NGG4 311 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 CMTM3Q96MX0 182 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 RHOFQ9HBH0 211 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 GNG8Q9UK08 70 aa11.15□□□□□ -0.62
CXCR4-203ENST00000466288 HSPB6O14558 160 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 PDCD5O14737 125 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 PTTG1O95997 202 aa11.14□□□□□ -0.63
CXCR4-203ENST00000466288 UCHL1P09936 223 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms