RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 ZNF660Q6AZW8 331 aaPredicted RBP10.55□□□□□ -0.72
CHD3-207ENST00000466233 LIN54Q6MZP7 749 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 DHRSXQ8N5I4 330 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 OR13C5Q8NGS8 318 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
CHD3-207ENST00000466233 PHYHIPQ92561 330 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 GGHQ92820 318 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 ORAI1Q96D31 301 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 NABP2Q9BQ15 211 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 ZNF251Q9BRH9 671 aa10.55□□□□□ -0.72
CHD3-207ENST00000466233 RIMS4Q9H426 269 aaPredicted RBP10.55□□□□□ -0.72
CHD3-207ENST00000466233 ZNF256Q9Y2P7 627 aaPredicted RBP10.55□□□□□ -0.72
CHD3-207ENST00000466233 IGHV7-81A0A0B4J1V7 117 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 C3orf84H3BNL1 204 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 CRTAPO75718 401 aaPredicted RBP10.54□□□□□ -0.72
CHD3-207ENST00000466233 RBBP9O75884 186 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 MC5RP33032 325 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 RANBP1P43487 201 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 RAB9AP51151 201 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 LUMP51884 338 aaPredicted RBP10.54□□□□□ -0.72
CHD3-207ENST00000466233 HMGN3Q15651 99 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 DEFB136Q30KP8 78 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 PYHIN1Q6K0P9 492 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 FAM53AQ6NSI3 398 aaPredicted RBP10.54□□□□□ -0.72
CHD3-207ENST00000466233 PRR18Q8N4B5 295 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 OR2AK2Q8NG84 335 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 OR10V1Q8NGI7 309 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 UBALD1Q8TB05 177 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 FBLIM1Q8WUP2 373 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 ABRACLQ9P1F3 81 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 KIAA1456Q9P272 454 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 STEAP1Q9UHE8 339 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 MGAT4AQ9UM21 535 aa10.54□□□□□ -0.72
CHD3-207ENST00000466233 KMT2CQ8NEZ4 4911 aaKnown RBP10.54□□□□□ -0.72
CHD3-207ENST00000466233 TRBV6-6A0A0A6YYG2 114 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 EBAG9O00559 213 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 RAB29O14966 203 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 BAG2O95816 211 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 BPNT1O95861 308 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 MAS1P04201 325 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 CELP19835 753 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 ECI1P42126 302 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 LRRC36Q1X8D7 754 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 ZNF260Q3ZCT1 412 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 C19orf54Q5BKX5 351 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 NKAPLQ5M9Q1 402 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 C1orf100Q5SVJ3 147 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 FAM27D1Q5T7N8 215 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 CD200R1LQ6Q8B3 271 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 KCNG3Q8TAE7 436 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 NEDD4LQ96PU5 975 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 TM2D1Q9BX74 207 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 BANF2Q9H503 90 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 PSORS1C1Q9UIG5 152 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 SMAD5-AS1Q9Y6J3 95 aa10.53□□□□□ -0.72
CHD3-207ENST00000466233 ERICH4A6NGS2 130 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 MYL12BO14950 172 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 ATP6V0E1O15342 81 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 NAPSAO96009 420 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 TMEM267Q0VDI3 215 aaPredicted RBP10.52□□□□□ -0.73
CHD3-207ENST00000466233 GLT8D1Q68CQ7 371 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 ZNF880Q6PDB4 577 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 C8orf59Q8N0T1 100 aaPredicted RBP10.52□□□□□ -0.73
CHD3-207ENST00000466233 NANOGP1Q8N7R0 232 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 CYGBQ8WWM9 190 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 MRPL20Q9BYC9 149 aaKnown RBP10.52□□□□□ -0.73
CHD3-207ENST00000466233 ANKRD60Q9BZ19 345 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 KLK15Q9H2R5 256 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 FKBP14Q9NWM8 211 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 SLC23A1Q9UHI7 598 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 RNF150Q9ULK6 438 aa10.52□□□□□ -0.73
CHD3-207ENST00000466233 SAA2-SAA4A0A096LPE2 208 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 A0A1W2PPK0 400 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 UBE2QL1A1L167 161 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 SAA2P0DJI9 122 aaPredicted RBP10.51□□□□□ -0.73
CHD3-207ENST00000466233 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 SLC2A2P11168 524 aaPredicted RBP10.51□□□□□ -0.73
CHD3-207ENST00000466233 PPP1CCP36873 323 aaKnown RBP10.51□□□□□ -0.73
CHD3-207ENST00000466233 RPS27AP62979 156 aaKnown RBP10.51□□□□□ -0.73
CHD3-207ENST00000466233 AKIRIN2Q53H80 203 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 ASPHD1Q5U4P2 390 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 ZFP41Q8N8Y5 198 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 IFI27L2Q9H2X8 130 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 NUBP2Q9Y5Y2 271 aa10.51□□□□□ -0.73
CHD3-207ENST00000466233 G3V318 75 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 RRHO14718 337 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 OVOL1O14753 267 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 MYF6P23409 242 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 GNMTQ14749 295 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 SVOPQ8N4V2 548 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 OR5AN1Q8NGI8 311 aa10.5□□□□□ -0.73
CHD3-207ENST00000466233 PTX4Q96A99 478 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms