RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CBLN4Q9NTU7 201 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 NAGKQ9UJ70 344 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 UBE2L5PA0A1B0GUS4 154 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 TRAPPC2LH3BP13 241 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 DEGS1O15121 323 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 IGKV1D-33P01593 117 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 IGKV1-33P01594 117 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 IGKV1-39P01597 117 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 IGKV1D-39P04432 117 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 PATE4P0C8F1 98 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 BTNL3Q6UXE8 466 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 GUCD1Q96NT3 240 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 OR6C1Q96RD1 312 aa16.79■□□□□ 0.28
SDF4-205ENST00000465727 MMP7P09237 267 aaPredicted RBP16.78■□□□□ 0.28
SDF4-205ENST00000465727 G0S2P27469 103 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 GAGE1Q13065 139 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 ATP6V1FQ16864 119 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 OR10V1Q8NGI7 309 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 OR4F5Q8NH21 305 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 NEIL1Q96FI4 390 aaPredicted RBP16.78■□□□□ 0.28
SDF4-205ENST00000465727 ALKBH3Q96Q83 286 aaPredicted RBP16.78■□□□□ 0.28
SDF4-205ENST00000465727 OR4F4Q96R69 305 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 TMEM9BQ9NQ34 198 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 LIN7CQ9NUP9 197 aaKnown RBP16.78■□□□□ 0.28
SDF4-205ENST00000465727 ERRFI1Q9UJM3 462 aaPredicted RBP16.78■□□□□ 0.28
SDF4-205ENST00000465727 POLR3KQ9Y2Y1 108 aaPredicted RBP16.78■□□□□ 0.28
SDF4-205ENST00000465727 ABCA7Q8IZY2 2146 aa16.78■□□□□ 0.28
SDF4-205ENST00000465727 IGKV1-5P01602 117 aa16.77■□□□□ 0.28
SDF4-205ENST00000465727 IZUMO4Q1ZYL8 232 aa16.77■□□□□ 0.28
SDF4-205ENST00000465727 SPANXN5Q5MJ07 72 aa16.77■□□□□ 0.28
SDF4-205ENST00000465727 TMEM14EPQ6UXP3 125 aa16.77■□□□□ 0.28
SDF4-205ENST00000465727 COLCA1Q6ZS62 124 aa16.77■□□□□ 0.28
SDF4-205ENST00000465727 AAED1Q7RTV5 226 aa16.77■□□□□ 0.28
SDF4-205ENST00000465727 ZNF25P17030 456 aaPredicted RBP16.77■□□□□ 0.27
SDF4-205ENST00000465727 RPL15P61313 204 aaKnown RBP16.77■□□□□ 0.27
SDF4-205ENST00000465727 TESK1Q15569 626 aa16.77■□□□□ 0.27
SDF4-205ENST00000465727 CEACAM21Q3KPI0 293 aa16.77■□□□□ 0.27
SDF4-205ENST00000465727 RARRES3Q9UL19 164 aa16.77■□□□□ 0.27
SDF4-205ENST00000465727 MYO9BQ13459 2157 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 HSPB6O14558 160 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 ZNF573Q86YE8 665 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 OR56B2PQ8NGI1 322 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 MTCH1Q9NZJ7 389 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 VCANP13611 3396 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 MARCH11A6NNE9 402 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 ZNF716A6NP11 495 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 MLNRO43193 412 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 CCL3P10147 92 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 ZDHHC23Q8IYP9 409 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 PSMF1Q92530 271 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 SLC25A22Q9H936 323 aa16.76■□□□□ 0.27
SDF4-205ENST00000465727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.75■□□□□ 0.27
SDF4-205ENST00000465727 CBR3O75828 277 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 RPLP1P05386 114 aaKnown RBP16.75■□□□□ 0.27
SDF4-205ENST00000465727 IL3RAP26951 378 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 NTF4P34130 210 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 GPM6AP51674 278 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 UBE2NP61088 152 aaKnown RBP16.75■□□□□ 0.27
SDF4-205ENST00000465727 PPP1CBP62140 327 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 CLEC12BQ2HXU8 276 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 NRN1LQ496H8 165 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 ACSM6Q6P461 480 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 TMEM144Q7Z5S9 345 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 OR10G9Q8NGN4 311 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 OR10G7Q8NGN6 311 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 FGFBP3Q8TAT2 258 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 PROK2Q9HC23 129 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 TRAPPC1Q9Y5R8 145 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 PXMP4Q9Y6I8 212 aa16.75■□□□□ 0.27
SDF4-205ENST00000465727 DLEU1O43261 78 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 PDGFBP01127 241 aaPredicted RBP16.74■□□□□ 0.27
SDF4-205ENST00000465727 COX5AP20674 150 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 ZNF468Q5VIY5 522 aaPredicted RBP16.74■□□□□ 0.27
SDF4-205ENST00000465727 WDYHV1Q96HA8 205 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 MS4A10Q96PG2 267 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 HS3ST6Q96QI5 342 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 TMEM147Q9BVK8 224 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 WNT16Q9UBV4 365 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 TNRC6AQ8NDV7 1962 aaKnown RBP16.74■□□□□ 0.27
SDF4-205ENST00000465727 TMEM265A0A087WTH1 108 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 TMPRSS2O15393 492 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 MYF5P13349 255 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 FOXL1Q12952 345 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 PCOLCEQ15113 449 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 RAB30Q15771 203 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 C20orf204Q6ZNR8 217 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 KCNE4Q8WWG9 221 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 ZCCHC14Q8WYQ9 949 aaKnown RBP16.74■□□□□ 0.27
SDF4-205ENST00000465727 ZNF576Q9H609 170 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 UBE2ZQ9H832 354 aaPredicted RBP16.74■□□□□ 0.27
SDF4-205ENST00000465727 GPR35Q9HC97 309 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 IL36RNQ9UBH0 155 aa16.74■□□□□ 0.27
SDF4-205ENST00000465727 ASCC3Q8N3C0 2202 aaKnown RBP16.74■□□□□ 0.27
SDF4-205ENST00000465727 COL6A3P12111 3177 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 LOC102723996A0A087X1L8 192 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 IGLV2-14P01704 120 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 OR3A1P47881 315 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 SLC25A45Q8N413 288 aa16.73■□□□□ 0.27
SDF4-205ENST00000465727 CDX2Q99626 313 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms