RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 MT-ND2P03891 347 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 HTR1AP08908 422 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 CD7P09564 240 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 GTF2A1P52655 376 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-214ENST00000465269 TMPRSS11AQ6ZMR5 421 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 NANOGP1Q8N7R0 232 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 CHST4Q8NCG5 386 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 MYCBPQ99417 103 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-214ENST00000465269 YTHDF1Q9BYJ9 559 aaKnown RBP11.32□□□□□ -0.6
HDAC6-214ENST00000465269 NEK6Q9HC98 313 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 SIGLEC8Q9NYZ4 499 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 BLOC1S6Q9UL45 172 aa11.32□□□□□ -0.6
HDAC6-214ENST00000465269 A0A0J9YWU9 116 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 H0Y980 276 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 CNIH1O95406 144 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 HLA-DRB1P01911 266 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 ATF1P18846 271 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 GBX2P52951 348 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-214ENST00000465269 SYNJ2BPP57105 145 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 PRSS35Q8N3Z0 413 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 DNAAF1Q8NEP3 725 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 OR10AC1Q8NH08 325 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 SRD5A3Q9H8P0 318 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 FRRS1LQ9P0K9 344 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 FOXA2Q9Y261 457 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-214ENST00000465269 ERGIC3Q9Y282 383 aa11.31□□□□□ -0.6
HDAC6-214ENST00000465269 SDCBPO00560 298 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-214ENST00000465269 MYL12BO14950 172 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 LALBAP00709 142 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 MAP2K4P45985 399 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 TPPP2P59282 170 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 NANOS3P60323 173 aaKnown RBP11.3□□□□□ -0.6
HDAC6-214ENST00000465269 ACTBP60709 375 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 LSAMPQ13449 338 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 XAF1Q6GPH4 301 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 SLC16A12Q6ZSM3 486 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 PRSS48Q7RTY5 328 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 OR2G2Q8NGZ5 317 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 RGP1Q92546 391 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-214ENST00000465269 FGGYQ96C11 551 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 RHOVQ96L33 236 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 OPALINQ96PE5 141 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 NEURL2Q9BR09 285 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 OVOL2Q9BRP0 275 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 FAM103A1Q9BTL3 118 aaKnown RBP11.3□□□□□ -0.6
HDAC6-214ENST00000465269 BABAM2Q9NXR7 383 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 GAB2Q9UQC2 676 aa11.3□□□□□ -0.6
HDAC6-214ENST00000465269 TPPPO94811 219 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 TFAP2AP05549 437 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 EGR2P11161 476 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-214ENST00000465269 ZNF134P52741 427 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 DEFA5Q01523 94 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 DYRK1AQ13627 763 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 ALKBH1Q13686 389 aaKnown RBP11.29□□□□□ -0.6
HDAC6-214ENST00000465269 IRF3Q14653 427 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 MED22Q15528 200 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 C5orf64Q2M2E5 130 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 ZFP41Q8N8Y5 198 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 ZNF485Q8NCK3 441 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 CCDC107Q8WV48 283 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 GFOD1Q9NXC2 390 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 ETAA1Q9NY74 926 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
HDAC6-214ENST00000465269 PNMA8CA0A1B0GUJ8 204 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 C15orf65H3BRN8 121 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 FCN1O00602 326 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 CSN3P07498 182 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 PRKACBP22694 351 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 IL3RAP26951 378 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 WNT4P56705 351 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 GABARAPL2P60520 117 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 KLF5Q13887 457 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-214ENST00000465269 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 LCN12Q6JVE5 192 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 FDX2Q6P4F2 183 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 PP6455Q8WZ26 134 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 MND1Q9BWT6 205 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 BARHL1Q9BZE3 327 aa11.28□□□□□ -0.6
HDAC6-214ENST00000465269 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 NBR2O15453 112 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 MRPL28Q13084 256 aaKnown RBP11.27□□□□□ -0.61
HDAC6-214ENST00000465269 SPHARQ15513 63 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 PIGYQ3MUY2 71 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.61
HDAC6-214ENST00000465269 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
HDAC6-214ENST00000465269 Q8N402 240 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms