RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 AKR1E2Q96JD6 320 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 HDHD3Q9BSH5 251 aaPredicted RBP11.05□□□□□ -0.64
LIMD1-203ENST00000465039 ABHD14AQ9BUJ0 271 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 AUNIPQ9H7T9 357 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 MMP24Q9Y5R2 645 aa11.05□□□□□ -0.64
LIMD1-203ENST00000465039 A0A1W2PPI3 338 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 FAM172BPA6NC97 362 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 TMEM235A6NFC5 223 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 GNG10P50151 68 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 CT45A1Q5HYN5 189 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 TMEM69Q5SWH9 247 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 DHRS7BQ6IAN0 325 aaPredicted RBP11.04□□□□□ -0.64
LIMD1-203ENST00000465039 C11orf88Q6PI97 169 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 IZUMO1Q8IYV9 350 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 OR4F5Q8NH21 305 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 CT45A3Q8NHU0 189 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 C15orf40Q8WUR7 153 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 IL1F10Q8WWZ1 152 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 PIPOXQ9P0Z9 390 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 SLC23A1Q9UHI7 598 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 HILPDAQ9Y5L2 63 aa11.04□□□□□ -0.64
LIMD1-203ENST00000465039 A0A075B6Q4 140 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 TRAV18A0A075B6X5 111 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 TRBV6-7A0A0A0MS04 114 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 A6NDX4 124 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 H3BMQ9 156 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 M0QZK8 103 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 HSPA12AO43301 675 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 FAM106CPP0CH98 169 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 PPP1CCP36873 323 aaKnown RBP11.03□□□□□ -0.64
LIMD1-203ENST00000465039 UTF1Q5T230 341 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
LIMD1-203ENST00000465039 DYNC2LI1Q8TCX1 351 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 RTN4IP1Q8WWV3 396 aaPredicted RBP11.03□□□□□ -0.64
LIMD1-203ENST00000465039 GCDHQ92947 438 aaPredicted RBP11.03□□□□□ -0.64
LIMD1-203ENST00000465039 CYYR1Q96J86 154 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 DUX5Q96PT3 197 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 MDFIQ99750 246 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 NPFFR1Q9GZQ6 430 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 RABL2AQ9UBK7 228 aaPredicted RBP11.03□□□□□ -0.64
LIMD1-203ENST00000465039 ADAM30Q9UKF2 790 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 RABL2BQ9UNT1 228 aa11.03□□□□□ -0.64
LIMD1-203ENST00000465039 IGHV3-43A0A0B4J1X8 118 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 RAB29O14966 203 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 TSPAN9O75954 239 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 SCTP09683 121 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 IGHV3-43DP0DP04 118 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 ZNF134P52741 427 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 EBI3Q14213 229 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 GNMTQ14749 295 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 SPCS2Q15005 226 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 ZNF833PQ6ZTB9 187 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 OR52L2PQ8NGH6 319 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 OR10V1Q8NGI7 309 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 OR10J5Q8NHC4 309 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 UBALD1Q8TB05 177 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 CFHR4Q92496 578 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 AGMATQ9BSE5 352 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 RBM38Q9H0Z9 239 aaKnown RBP11.02□□□□□ -0.65
LIMD1-203ENST00000465039 IFI27L2Q9H2X8 130 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 C16orf95Q9H693 158 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 SCPEP1Q9HB40 452 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 COMMD3Q9UBI1 195 aa11.02□□□□□ -0.65
LIMD1-203ENST00000465039 IGHV1-3A0A0C4DH29 117 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 IGKV1-6A0A0C4DH72 117 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 TIMM23O14925 209 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 SSX5O60225 188 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 OR2F2O95006 317 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 CD1BP29016 333 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 RAG2P55895 527 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 TAS2R20P59543 309 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 HERPUD1Q15011 391 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 CNIH2Q6PI25 160 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 HOGA1Q86XE5 327 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 OR8H1Q8NGG4 311 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 OR4C13Q8NGP0 309 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 NUDCD2Q8WVJ2 157 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 S1PR3Q99500 378 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 C1RLQ9NZP8 487 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 NDUFA13Q9P0J0 144 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 ANXA10Q9UJ72 324 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 ANAPC10Q9UM13 185 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 GAB2Q9UQC2 676 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 CEPT1Q9Y6K0 416 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 A3GALT2U3KPV4 340 aa11.01□□□□□ -0.65
LIMD1-203ENST00000465039 TENM1Q9UKZ4 2725 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 SULT1C2O00338 296 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 SLC31A2O15432 143 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 IGHV3-7P01780 117 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 EIF4EP06730 217 aaKnown RBP11□□□□□ -0.65
LIMD1-203ENST00000465039 CEACAM6P40199 344 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 SRSF2Q01130 221 aaKnown RBP11□□□□□ -0.65
LIMD1-203ENST00000465039 ODF3L1Q8IXM7 274 aa11□□□□□ -0.65
LIMD1-203ENST00000465039 LYG1Q8N1E2 194 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms