RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 IAPPP10997 89 aa17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 GABRA2P47869 451 aa17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 RPRMLQ8N4K4 120 aa17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 COMMD1Q8N668 190 aa17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 MRGPRDQ8TDS7 321 aa17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 GALMQ96C23 342 aa17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 LIN7CQ9NUP9 197 aaKnown RBP17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 PTPRZ1P23471 2315 aaPredicted RBP17.12■□□□□ 0.33
TUBGCP3-204ENST00000464139 SLC25A6P12236 298 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 IL2RGP31785 369 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 P2RY6Q15077 328 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 PEA15Q15121 130 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 LSM10Q969L4 123 aaKnown RBP17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 FBXO7Q9Y3I1 522 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 HBZP02008 142 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 RPL23AP62750 156 aaKnown RBP17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 COL10A1Q03692 680 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 HFEQ30201 348 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 SLC35E4Q6ICL7 350 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 FAM122CQ6P4D5 195 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 OR2D2Q9H210 308 aa17.11■□□□□ 0.33
TUBGCP3-204ENST00000464139 RP1L1Q8IWN7 2480 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 MBD3L4A6NDZ8 208 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 MBD3L3A6NE82 208 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 MBD3L5A6NJ08 208 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 TXNL1O43396 289 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 GLIPR1P48060 266 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 CCL20P78556 96 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 MSMPQ1L6U9 139 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 OR2B11Q5JQS5 317 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 LRP11Q86VZ4 500 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 ZNF808Q8N4W9 903 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 MBD3L2Q8NHZ7 208 aaPredicted RBP17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 ATP5SQ99766 215 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 SLC25A15Q9Y619 301 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 H2AFB1P0C5Y9 115 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 AKR1C3P42330 323 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 ZNF83P51522 516 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 STX12Q86Y82 276 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 OR2Z1Q8NG97 314 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 C5orf30Q96GV9 206 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 DUSP13Q9UII6 198 aa17.1■□□□□ 0.33
TUBGCP3-204ENST00000464139 OOEPA6NGQ2 149 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 TM4SF5O14894 197 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 SYNGR2O43760 224 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 MBNL2Q5VZF2 373 aaKnown RBP17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 BEND4Q6ZU67 534 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 RAB40CQ96S21 281 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 KPTNQ9Y664 436 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 USF3Q68DE3 2245 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 PIGBOS1A0A0B4J2F0 54 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 K7EM74 188 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 RAMP3O60896 148 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 SULT1A1P50225 295 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 KRBOX4Q5JUW0 171 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 LRRC29Q8WV35 223 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 NDRG3Q9UGV2 375 aa17.09■□□□□ 0.33
TUBGCP3-204ENST00000464139 H7C2Y5 167 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 TUBG1P23258 451 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 SSTR5P35346 364 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 FGFRL1Q8N441 504 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 ZNF645Q8N7E2 425 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 PRSS33Q8NF86 280 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 OR10Z1Q8NGY1 313 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 RFESDQ8TAC1 157 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 RARRES2Q99969 163 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 TUBG2Q9NRH3 451 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 FAM215AQ9Y5M1 114 aa17.08■□□□□ 0.33
TUBGCP3-204ENST00000464139 IGHV3-43A0A0B4J1X8 118 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 UMAD1C9J7I0 102 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 IGHV3-43DP0DP04 118 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 CTRB1P17538 263 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 RPL30P62888 115 aaKnown RBP17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 SMIM21Q3B7S5 101 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 CTRB2Q6GPI1 263 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 ZNF474Q6S9Z5 364 aaPredicted RBP17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 OR13A1Q8NGR1 328 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 PRR7Q8TB68 274 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 GNPNAT1Q96EK6 184 aaPredicted RBP17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 DCTN5Q9BTE1 182 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 WSB1Q9Y6I7 421 aa17.08■□□□□ 0.32
TUBGCP3-204ENST00000464139 METTL15P1P0C7V9 234 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 IGFL3Q6UXB1 125 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 CD177Q8N6Q3 437 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 S100PBPQ96BU1 408 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 PSENENQ9NZ42 101 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 MAP1BP46821 2468 aaKnown RBP17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 M0R1B8 84 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 CD200P41217 278 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 SPSB3Q6PJ21 355 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 BTNL3Q6UXE8 466 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 NINJ1Q92982 152 aa17.07■□□□□ 0.32
TUBGCP3-204ENST00000464139 EGR1P18146 543 aa17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 ARL16Q0P5N6 197 aa17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 ZNF816Q0VGE8 651 aaPredicted RBP17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 THNSL2Q86YJ6 484 aa17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 C20orf24Q9BUV8 137 aa17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 PBDC1Q9BVG4 233 aa17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 RNF212BA8MTL3 300 aa17.06■□□□□ 0.32
TUBGCP3-204ENST00000464139 DEFB108AA8MXU0 73 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms