RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 SCN3BQ9NY72 215 aa8.62□□□□□ -1.03
PTPN7-204ENST00000462815 ING4Q9UNL4 249 aa8.62□□□□□ -1.03
PTPN7-204ENST00000462815 WSB1Q9Y6I7 421 aa8.62□□□□□ -1.03
PTPN7-204ENST00000462815 TRAV8-7A0A075B6U6 113 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 TRIM64CA6NLI5 447 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 TNFAIP8O95379 198 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 GP9P14770 177 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 BLVRBP30043 206 aaPredicted RBP8.61□□□□□ -1.03
PTPN7-204ENST00000462815 BDKRB2P30411 391 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 ETV1P50549 477 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 RAB9AP51151 201 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 GBX2P52951 348 aaPredicted RBP8.61□□□□□ -1.03
PTPN7-204ENST00000462815 SLURP1P55000 103 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 ACTBP60709 375 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 IRF3Q14653 427 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 MMDQ15546 238 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 CCDC58Q4VC31 144 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 MORN2Q502X0 79 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 ATAD3CQ5T2N8 411 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 RNLSQ5VYX0 342 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 SIGIRRQ6IA17 410 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 RPL22L1Q6P5R6 122 aaKnown RBP8.61□□□□□ -1.03
PTPN7-204ENST00000462815 AHSA2Q719I0 299 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 NPBQ8NG41 125 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 OR4K15Q8NH41 348 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 OR5B12Q96R08 314 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 CITED4Q96RK1 184 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 NABP2Q9BQ15 211 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 TM2D3Q9BRN9 247 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 MRPL20Q9BYC9 149 aaKnown RBP8.61□□□□□ -1.03
PTPN7-204ENST00000462815 EDA2RQ9HAV5 297 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 PALMDQ9NP74 551 aa8.61□□□□□ -1.03
PTPN7-204ENST00000462815 DIMT1Q9UNQ2 313 aaKnown RBP8.61□□□□□ -1.03
PTPN7-204ENST00000462815 IGHV4OR15-8A0A075B7B6 117 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 A0A087WW49 117 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 IRGMA1A4Y4 181 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 OVOL1O14753 267 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 OGG1O15527 345 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 MRPS14O60783 128 aaKnown RBP8.6□□□□□ -1.03
PTPN7-204ENST00000462815 ZNF780AO75290 641 aaPredicted RBP8.6□□□□□ -1.03
PTPN7-204ENST00000462815 CSTBP04080 98 aaKnown RBP8.6□□□□□ -1.03
PTPN7-204ENST00000462815 EGR2P11161 476 aaPredicted RBP8.6□□□□□ -1.03
PTPN7-204ENST00000462815 LYL1P12980 280 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 GTF2F2P13984 249 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 DCKP27707 260 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 DOC2BQ14184 412 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 C5orf64Q2M2E5 130 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 SLC22A6Q4U2R8 563 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 OR2G6Q5TZ20 316 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 ACSM6Q6P461 480 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 ZNF833PQ6ZTB9 187 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 PRSS48Q7RTY5 328 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 Q8N1Y9 231 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 ZNF485Q8NCK3 441 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 SMIM19Q96E16 107 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 PGLYRP3Q96LB9 341 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 MYCBPQ99417 103 aaPredicted RBP8.6□□□□□ -1.03
PTPN7-204ENST00000462815 ZNF251Q9BRH9 671 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 TOLLIPQ9H0E2 274 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 GNG12Q9UBI6 72 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 CLEC2DQ9UHP7 191 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 BLOC1S6Q9UL45 172 aa8.6□□□□□ -1.03
PTPN7-204ENST00000462815 TRBV5-7A0A0A0MS05 114 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 NBR2O15453 112 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 SPINT2O43291 252 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 RGS10O43665 173 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 CD2P06729 351 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 LGALS1P09382 135 aaKnown RBP8.59□□□□□ -1.03
PTPN7-204ENST00000462815 SMIM18P0DKX4 95 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.03
PTPN7-204ENST00000462815 FSTP19883 344 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 LY6G6FQ5SQ64 297 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 C6orf183Q5T699 404 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 FAM27D1Q5T7N8 215 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 DMKNQ6E0U4 476 aaPredicted RBP8.59□□□□□ -1.03
PTPN7-204ENST00000462815 ZFAND6Q6FIF0 208 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 RAB12Q6IQ22 244 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 ZNF773Q6PK81 442 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 SPARTQ8N0X7 666 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 STX19Q8N4C7 294 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 OR52L2PQ8NGH6 319 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 MRPL30Q8TCC3 161 aaKnown RBP8.59□□□□□ -1.03
PTPN7-204ENST00000462815 Q96M66 194 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 ABHD14AQ9BUJ0 271 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 IFI27L2Q9H2X8 130 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 TAF9BQ9HBM6 251 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 SPACA1Q9HBV2 294 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 PARP11Q9NR21 331 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 C19orf73Q9NVV2 129 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 ETAA1Q9NY74 926 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 TRAPPC2LQ9UL33 140 aa8.59□□□□□ -1.03
PTPN7-204ENST00000462815 SAA2-SAA4A0A096LPE2 208 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 FAM90A7PA6NKC0 464 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 FAM90A23PA8MXZ1 464 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 A8MZ25 164 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 LINC01619G3V211 115 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 SAP30O75446 220 aa8.58□□□□□ -1.04
PTPN7-204ENST00000462815 SAA2P0DJI9 122 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms