RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 IGHV3-43DP0DP04 118 aa13.71□□□□□ -0.22
SMC4-204ENST00000462787 LRRC75AQ8NAA5 344 aa13.71□□□□□ -0.22
SMC4-204ENST00000462787 OR4F17Q8NGA8 305 aa13.71□□□□□ -0.22
SMC4-204ENST00000462787 PLPPR2Q96GM1 343 aa13.71□□□□□ -0.22
SMC4-204ENST00000462787 DNAJC4Q9NNZ3 241 aa13.71□□□□□ -0.22
SMC4-204ENST00000462787 SLC22A20A6NK97 555 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 DNPH1O43598 174 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 POU2F2P09086 479 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 RHBDD2Q6NTF9 364 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 QTRT1Q9BXR0 403 aaKnown RBP13.7□□□□□ -0.22
SMC4-204ENST00000462787 SDF2L1Q9HCN8 221 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 ATP23Q9Y6H3 246 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 ZNF236Q9UL36 1845 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 TSPAN2O60636 221 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 FGF12P61328 243 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 GABRA6Q16445 453 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 ZNF766Q5HY98 468 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 SLC25A34Q6PIV7 304 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 LYG1Q8N1E2 194 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 CLDND2Q8NHS1 167 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 MIEN1Q9BRT3 115 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 RPRMQ9NS64 109 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 MYO9BQ13459 2157 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 SBF2Q86WG5 1849 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 H0YIZ8 118 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 BLNKQ8WV28 456 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 SMIM12Q96EX1 92 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 SPSB2Q99619 263 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 LHFPL6Q9Y693 200 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
SMC4-204ENST00000462787 TMEM11P17152 192 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 IGFBP3P17936 291 aaPredicted RBP13.7□□□□□ -0.22
SMC4-204ENST00000462787 RPL13AP40429 203 aaKnown RBP13.7□□□□□ -0.22
SMC4-204ENST00000462787 SFTPA1Q8IWL2 248 aa13.7□□□□□ -0.22
SMC4-204ENST00000462787 LSM10Q969L4 123 aaKnown RBP13.7□□□□□ -0.22
SMC4-204ENST00000462787 LRRC37AA6NMS7 1700 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 NPIPB13A6NJU9 1138 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 NPIPB4C9JG80 1138 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 STXBP6Q8NFX7 210 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 OR2M3Q8NG83 312 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 DEFB127Q9H1M4 99 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 NPVFQ9HCQ7 196 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 AMY1AP04745 511 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 IL11P20809 199 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 NPY1RP25929 384 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 SLC23A3Q6PIS1 610 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 RASL10BQ96S79 203 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 ZNF355PQ9NSJ1 428 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 ZFP30Q9Y2G7 519 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 WDYHV1Q96HA8 205 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 RCC1LQ96I51 464 aaKnown RBP13.69□□□□□ -0.22
SMC4-204ENST00000462787 MS4A18H0YCH9 400 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 SCTP09683 121 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 COL9A1P20849 921 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 MS4A18Q3C1V0 323 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 CXorf67Q86X51 503 aaPredicted RBP13.69□□□□□ -0.22
SMC4-204ENST00000462787 OR4X1Q8NH49 305 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 GFI1Q99684 422 aa13.69□□□□□ -0.22
SMC4-204ENST00000462787 MYO16Q9Y6X6 1858 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 TRBV6-7A0A0A0MS04 114 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 HIST3H2BBQ8N257 126 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 SFRP2Q96HF1 295 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 RAB29O14966 203 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 CCL2P13500 99 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 WBP1LQ9NX94 342 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 A0A1W2PN81 502 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 IBA57Q5T440 356 aaKnown RBP13.68□□□□□ -0.22
SMC4-204ENST00000462787 OR2J1Q9GZK6 312 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 MEX3AA1L020 520 aaKnown RBP13.68□□□□□ -0.22
SMC4-204ENST00000462787 CA2P00918 260 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 PLP1P60201 277 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 OR10S1Q8NGN2 331 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 OR2T6Q8NHC8 308 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 TMEM170AQ8WVE7 144 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 FBLN5Q9UBX5 448 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 PRNDQ9UKY0 176 aa13.68□□□□□ -0.22
SMC4-204ENST00000462787 RGPD3A6NKT7 1758 aaPredicted RBP13.67□□□□□ -0.22
SMC4-204ENST00000462787 RGPD4Q7Z3J3 1758 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 COL8A1P27658 744 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 EGR4Q05215 589 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 DNLZQ5SXM8 178 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 TMEM230Q96A57 120 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 TRPM6Q9BX84 2022 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 TWSG1Q9GZX9 223 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 PRSS1P07477 247 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 HES1Q14469 280 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 TM2D1Q9BX74 207 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 CXXC4Q9H2H0 198 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 CLEC3BP05452 202 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 GNG10P50151 68 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 TMEM45BQ96B21 275 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 GZMHP20718 246 aa13.67□□□□□ -0.22
SMC4-204ENST00000462787 ERVFRD-1P60508 538 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms