RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ASPMQ8IZT6 3477 aa14.3□□□□□ -0.12
ACTB-207ENST00000462494 HAND1O96004 215 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 MPV17P39210 176 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 ZNF146Q15072 292 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 LOXL4Q96JB6 756 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 GNG13Q9P2W3 67 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 PSPNO60542 156 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 AGFG2O95081 481 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 ACAA1P09110 424 aaPredicted RBP14.29□□□□□ -0.12
ACTB-207ENST00000462494 RAC2P15153 192 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 OR2B11Q5JQS5 317 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 ZNF506Q5JVG8 444 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 SPANXN5Q5MJ07 72 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 DPPA3Q6W0C5 159 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 ZNF826PQ6ZT77 177 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 LILRB2Q8N423 598 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 VSIRQ9H7M9 311 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 MBNL3Q9NUK0 354 aaKnown RBP14.29□□□□□ -0.12
ACTB-207ENST00000462494 KCNIP1Q9NZI2 227 aa14.29□□□□□ -0.12
ACTB-207ENST00000462494 J3QW42 95 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 WNT9BO14905 357 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 HSPB1P04792 205 aaKnown RBP14.28□□□□□ -0.12
ACTB-207ENST00000462494 SOX8P57073 446 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 FABP9Q0Z7S8 132 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 SP5Q6BEB4 398 aaPredicted RBP14.28□□□□□ -0.12
ACTB-207ENST00000462494 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
ACTB-207ENST00000462494 OR1L1Q8NH94 360 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 KLF14Q8TD94 323 aaPredicted RBP14.28□□□□□ -0.12
ACTB-207ENST00000462494 TMEM9BQ9NQ34 198 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 RPRMQ9NS64 109 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 WIPI2Q9Y4P8 454 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
ACTB-207ENST00000462494 IQCF6A8MYZ5 107 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 WNT2P09544 360 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 OR3A1P47881 315 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 TNFSF10P50591 281 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 CCL11P51671 97 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 DLK1P80370 383 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 FAM53AQ6NSI3 398 aaPredicted RBP14.27□□□□□ -0.12
ACTB-207ENST00000462494 FIP1L1Q6UN15 594 aaKnown RBP14.27□□□□□ -0.12
ACTB-207ENST00000462494 LCN15Q6UWW0 184 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 FGFRL1Q8N441 504 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 ZNF808Q8N4W9 903 aaPredicted RBP14.27□□□□□ -0.12
ACTB-207ENST00000462494 NIPSNAP3BQ9BS92 247 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 DIDO1Q9BTC0 2240 aaKnown RBP14.27□□□□□ -0.12
ACTB-207ENST00000462494 GTF3C1Q12789 2109 aa14.27□□□□□ -0.12
ACTB-207ENST00000462494 ZFP92A6NM28 416 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 UBE2CO00762 179 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 WISP2O76076 250 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 TFF1P04155 84 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 HBG1P69891 147 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 HBG2P69892 147 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 GABRA6Q16445 453 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 ZNF525Q8N782 197 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 FZR1Q9UM11 496 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 MMP24Q9Y5R2 645 aa14.27□□□□□ -0.13
ACTB-207ENST00000462494 SPENQ96T58 3664 aaKnown RBP14.26□□□□□ -0.13
ACTB-207ENST00000462494 NQO2P16083 231 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 FGF8P55075 233 aaPredicted RBP14.26□□□□□ -0.13
ACTB-207ENST00000462494 AESQ08117 197 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 HNF4GQ14541 408 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 FAM214BQ7L5A3 538 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 HAPLN4Q86UW8 402 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 GALMQ96C23 342 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 OR2D2Q9H210 308 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 TMEM30CPA0ZSE6 113 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 RAMP3O60896 148 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 HOXC12P31275 282 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 IL2RGP31785 369 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 CD200P41217 278 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 RPS10P46783 165 aaKnown RBP14.26□□□□□ -0.13
ACTB-207ENST00000462494 KHDC3LQ587J8 217 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 OR8G2PQ6IF36 304 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 OR52L2PQ8NGH6 319 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 TVP23CQ96ET8 276 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 URGCP-MRPS24S4R325 110 aa14.26□□□□□ -0.13
ACTB-207ENST00000462494 PCNX2A6NKB5 2137 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 RNF212BA8MTL3 300 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 NKX2-8O15522 239 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 MLNRO43193 412 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 CLDN1O95832 211 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 KRASP01116 189 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 RAB11AP62491 216 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 ZNF816Q0VGE8 651 aaPredicted RBP14.25□□□□□ -0.13
ACTB-207ENST00000462494 SRSF6Q13247 344 aaKnown RBP14.25□□□□□ -0.13
ACTB-207ENST00000462494 ZNF787Q6DD87 383 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 INO80CQ6PI98 192 aaPredicted RBP14.25□□□□□ -0.13
ACTB-207ENST00000462494 Q6ZT83 130 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 SLC16A13Q7RTY0 426 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 MUCL1Q96DR8 90 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 ZNF665Q9H7R5 613 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 UFSP2Q9NUQ7 469 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 CLCF1Q9UBD9 225 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 LOC102723971A0A1B0GUV8 181 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 TMEM210A6NLX4 147 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 C12orf77C9JDV5 145 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 IFNA17P01571 189 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 ZNF806P0C7X5 589 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 G6PCP35575 357 aa14.25□□□□□ -0.13
ACTB-207ENST00000462494 ELLP55199 621 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms