RNA–Protein interactions for RNA: ENST00000461983.5

C1S-209, Transcript of complement C1s, human

TSL 2

Gene C1S, Length 950 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1S-209	ENST00000461983	KCNIP3	Q9Y2W7	256 aa		12.72	□□□□□ -0.37
C1S-209	ENST00000461983	FLNB	O75369	2602 aa	Known RBP	12.72	□□□□□ -0.37
C1S-209	ENST00000461983	SPG11	Q96JI7	2443 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	OR5H14	A6NHG9	310 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	GPR31	O00270	319 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	RAB29	O14966	203 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	ANXA3	P12429	323 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	CCL3L1	P16619	93 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	ZFP36	P26651	326 aa	Known RBP	12.71	□□□□□ -0.37
C1S-209	ENST00000461983	PPP1CC	P36873	323 aa	Known RBP	12.71	□□□□□ -0.37
C1S-209	ENST00000461983	DVL1P1	P54792	670 aa	Predicted RBP	12.71	□□□□□ -0.37
C1S-209	ENST00000461983	FXYD4	P59646	89 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	LTC4S	Q16873	150 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	TMEM128	Q5BJH2	165 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	PRAMEF5	Q5TYX0	476 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	LINC00311	Q8N616	119 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	ZNF596	Q8TC21	504 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	MARCH1	Q8TCQ1	289 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983		Q96MF0	132 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	ABHD14A	Q9BUJ0	271 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	RSRP1	Q9BUV0	290 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.71	□□□□□ -0.37
C1S-209	ENST00000461983	NAV2	Q8IVL1	2488 aa		12.71	□□□□□ -0.37
C1S-209	ENST00000461983		J3QLI3	93 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	ARPC1B	O15143	372 aa	Known RBP	12.7	□□□□□ -0.38
C1S-209	ENST00000461983	IL5	P05113	134 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	OR8U9	P0C7N5	309 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	OMG	P23515	440 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	RND3	P61587	244 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	PAX2	Q02962	417 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	KCTD9	Q7L273	389 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	SLC25A42	Q86VD7	318 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	ABHD12	Q8N2K0	398 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	TEX29	Q8N6K0	151 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	ZNF645	Q8N7E2	425 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	OR8U1	Q8NH10	309 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	SECTM1	Q8WVN6	248 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	S1PR3	Q99500	378 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	CLEC7A	Q9BXN2	247 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	TMPRSS13	Q9BYE2	586 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	INSIG2	Q9Y5U4	225 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	AKAP6	Q13023	2319 aa		12.7	□□□□□ -0.38
C1S-209	ENST00000461983	TRAV6	A0A075B6T7	132 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	TOX4	O94842	621 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	GPR12	P47775	334 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	ARF6	P62330	175 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	TAGLN	Q01995	201 aa	Known RBP	12.69	□□□□□ -0.38
C1S-209	ENST00000461983	DCAF12L2	Q5VW00	463 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	FAM71F2	Q6NXP2	309 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	SLC25A48	Q6ZT89	311 aa	Known RBP	12.69	□□□□□ -0.38
C1S-209	ENST00000461983	TMED4	Q7Z7H5	227 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	GLCCI1	Q86VQ1	547 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	SGPP2	Q8IWX5	399 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	TCTEX1D1	Q8N7M0	179 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	BEND2	Q8NDZ0	799 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	BVES	Q8NE79	360 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	OR10X1	Q8NGY0	326 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	UBALD1	Q8TB05	177 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	DACT3	Q96B18	629 aa	Predicted RBP	12.69	□□□□□ -0.38
C1S-209	ENST00000461983	TMEM186	Q96B77	213 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	ADTRP	Q96IZ2	230 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	MMP28	Q9H239	520 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	KCNS2	Q9ULS6	477 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	FBN2	P35556	2912 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	ARID1A	O14497	2285 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	APC	P25054	2843 aa		12.69	□□□□□ -0.38
C1S-209	ENST00000461983	IGHV3-43	A0A0B4J1X8	118 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	12.68	□□□□□ -0.38
C1S-209	ENST00000461983	SNRPGP15	A8MWD9	76 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	FAM157A	C9JC47	383 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	RNF223	E7ERA6	249 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983		J3QR06	171 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	IGHV3-43D	P0DP04	118 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	GNRHR	P30968	328 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	CEACAM3	P40198	252 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	SRPX	P78539	464 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	PAX8	Q06710	450 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	CATR1	Q13166	79 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	C4orf46	Q504U0	113 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	ZNF66	Q6ZN08	573 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983		Q6ZNX1	250 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	C11orf42	Q8N5U0	333 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	HSD17B10	Q99714	261 aa	Known RBP	12.68	□□□□□ -0.38
C1S-209	ENST00000461983	SUCNR1	Q9BXA5	334 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	LPAR2	Q9HBW0	351 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	PSG11	Q9UQ72	335 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	UNC79	Q9P2D8	2635 aa		12.68	□□□□□ -0.38
C1S-209	ENST00000461983	ANKRD17	O75179	2603 aa	Known RBP	12.67	□□□□□ -0.38
C1S-209	ENST00000461983	MEX3A	A1L020	520 aa	Known RBP	12.67	□□□□□ -0.38
C1S-209	ENST00000461983	TXNL1	O43396	289 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	PIGP	P57054	158 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	GNMT	Q14749	295 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	CYB5R2	Q6BCY4	276 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	ZNF439	Q8NDP4	499 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	OR11H6	Q8NGC7	330 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	CD300LF	Q8TDQ1	290 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.67	□□□□□ -0.38
C1S-209	ENST00000461983	UPRT	Q96BW1	309 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	AGMAT	Q9BSE5	352 aa		12.67	□□□□□ -0.38
C1S-209	ENST00000461983	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms