RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 TM2D1Q9BX74 207 aa10.99□□□□□ -0.65
USP4-206ENST00000461553 PLGRKTQ9HBL7 147 aa10.99□□□□□ -0.65
USP4-206ENST00000461553 STEAP1Q9UHE8 339 aa10.99□□□□□ -0.65
USP4-206ENST00000461553 LRRC42Q9Y546 428 aa10.99□□□□□ -0.65
USP4-206ENST00000461553 TMEM14DPA8MWL7 114 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 YPEL1O60688 119 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 ARL6IP5O75915 188 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 SLC2A2P11168 524 aaPredicted RBP10.98□□□□□ -0.65
USP4-206ENST00000461553 PNLIPRP3Q17RR3 467 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 C18orf65Q6ZTR6 163 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 ZNF695Q8IW36 515 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 SVOPQ8N4V2 548 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 NRG4Q8WWG1 115 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 IL1F10Q8WWZ1 152 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 TMEM203Q969S6 136 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 YPEL2Q96QA6 119 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 URM1Q9BTM9 101 aaKnown RBP10.98□□□□□ -0.65
USP4-206ENST00000461553 FAAP24Q9BTP7 215 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
USP4-206ENST00000461553 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
USP4-206ENST00000461553 ANKRD60Q9BZ19 345 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 CCDC90BQ9GZT6 254 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 PLSCR3Q9NRY6 295 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 PLEKHJ1Q9NW61 149 aa10.98□□□□□ -0.65
USP4-206ENST00000461553 ZNF107Q9UII5 783 aaPredicted RBP10.98□□□□□ -0.65
USP4-206ENST00000461553 DNAH9Q9NYC9 4486 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 SAA2-SAA4A0A096LPE2 208 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 LINC01548A6NM66 108 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 SAA2P0DJI9 122 aaPredicted RBP10.97□□□□□ -0.65
USP4-206ENST00000461553 OR5H8P0DN80 308 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 ARSBP15848 533 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 BLVRBP30043 206 aaPredicted RBP10.97□□□□□ -0.65
USP4-206ENST00000461553 MYCNOSP40205 109 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 F2RL1P55085 397 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 RPS25P62851 125 aaKnown RBP10.97□□□□□ -0.65
USP4-206ENST00000461553 MLLT11Q13015 90 aaPredicted RBP10.97□□□□□ -0.65
USP4-206ENST00000461553 FOXE3Q13461 319 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 LY6G6FQ5SQ64 297 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 ZNF833PQ6ZTB9 187 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 ODF3L1Q8IXM7 274 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 HSPB9Q9BQS6 159 aa10.97□□□□□ -0.65
USP4-206ENST00000461553 SLC17A2O00624 439 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 NAPSAO96009 420 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 RPLP1P05386 114 aaKnown RBP10.96□□□□□ -0.65
USP4-206ENST00000461553 ELANEP08246 267 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 CPEP16870 476 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 HOXD3P31249 432 aaPredicted RBP10.96□□□□□ -0.65
USP4-206ENST00000461553 RANBP1P43487 201 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 HSPA13P48723 471 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 RAB25P57735 213 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 ACTBP60709 375 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 TPBGQ13641 420 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 P2RY14Q15391 338 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 RAB11BQ15907 218 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 PRSS48Q7RTY5 328 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 OR8U1Q8NH10 309 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 NABP2Q9BQ15 211 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 ZNF251Q9BRH9 671 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 IFI27L2Q9H2X8 130 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 DUSP21Q9H596 190 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 PIPOXQ9P0Z9 390 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 KIAA1456Q9P272 454 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 BLOC1S6Q9UL45 172 aa10.96□□□□□ -0.65
USP4-206ENST00000461553 A0A0A6YYD4 124 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 NBR2O15453 112 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 ST8SIA5O15466 376 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 CRHBPP24387 322 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 CALRP27797 417 aaKnown RBP10.95□□□□□ -0.66
USP4-206ENST00000461553 OR3A3P47888 321 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 HLA-DRB3P79483 266 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 QRFPP83859 136 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 IZUMO2Q6UXV1 221 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 TMEM91Q6ZNR0 172 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 RBMXL1Q96E39 390 aaKnown RBP10.95□□□□□ -0.66
USP4-206ENST00000461553 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 P2RX4Q99571 388 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 LPAR5Q9H1C0 372 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 RIMS4Q9H426 269 aaPredicted RBP10.95□□□□□ -0.66
USP4-206ENST00000461553 C12orf4Q9NQ89 552 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 ZNF580Q9UK33 172 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 MGAT4AQ9UM21 535 aa10.95□□□□□ -0.66
USP4-206ENST00000461553 AK6Q9Y3D8 172 aaKnown RBP10.95□□□□□ -0.66
USP4-206ENST00000461553 TRBV6-6A0A0A6YYG2 114 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 K7EIL1 84 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 CCL24O00175 119 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 RAB29O14966 203 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 HSPA12AO43301 675 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 IGHG4P01861 327 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 HLA-DRB1P01911 266 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 IGF1P05019 195 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 CFHR3Q02985 330 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 TBCEQ15813 527 aaPredicted RBP10.94□□□□□ -0.66
USP4-206ENST00000461553 DEFB136Q30KP8 78 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 FAM131AQ6UXB0 335 aa10.94□□□□□ -0.66
USP4-206ENST00000461553 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms