RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 DUSP1P28562 367 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 RAB7AP51149 207 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 CLDN12P56749 244 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 OR8H3Q8N146 312 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 FAM58AQ8N1B3 248 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 ACOT12Q8WYK0 555 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 SLIRPQ9GZT3 109 aaKnown RBP13.44□□□□□ -0.26
TOP3A-202ENST00000461127 C6orf62Q9GZU0 229 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-202ENST00000461127 IL36RNQ9UBH0 155 aa13.44□□□□□ -0.26
TOP3A-202ENST00000461127 LINC01548A6NM66 108 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 NCBP2LA6PVI3 153 aaKnown RBP13.43□□□□□ -0.26
TOP3A-202ENST00000461127 SIRPB1O00241 398 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 SH2D1BO14796 132 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 IGKV1D-33P01593 117 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 IGKV1-33P01594 117 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 CD37P11049 281 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 GPR12P47775 334 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 MADCAM1Q13477 382 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 ZNF146Q15072 292 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 SPIN3Q5JUX0 258 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 GLIPR1L1Q6UWM5 242 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 LYPD6Q86Y78 171 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 FAM3DQ96BQ1 224 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 ABRACLQ9P1F3 81 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 ING4Q9UNL4 249 aa13.43□□□□□ -0.26
TOP3A-202ENST00000461127 A0A075B6Q4 140 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 A0A0B4J203 849 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 A0A1W2PPI3 338 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 ODAMA1E959 279 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 ZNF729A6NN14 1252 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-202ENST00000461127 BPNT1O95861 308 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 UBBP0CG47 229 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 CALCBP10092 127 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 SNRPBP14678 240 aaKnown RBP13.42□□□□□ -0.26
TOP3A-202ENST00000461127 GP9P14770 177 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 ARSBP15848 533 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 PRKACAP17612 351 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 GLIPR1P48060 266 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
TOP3A-202ENST00000461127 AESQ08117 197 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 PDZK1IP1Q13113 114 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 TGIF2LXQ8IUE1 241 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 ABCG5Q9H222 651 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 LIN7CQ9NUP9 197 aaKnown RBP13.42□□□□□ -0.26
TOP3A-202ENST00000461127 RBFOX1Q9NWB1 397 aaKnown RBP13.42□□□□□ -0.26
TOP3A-202ENST00000461127 COMMD3Q9UBI1 195 aa13.42□□□□□ -0.26
TOP3A-202ENST00000461127 J3QR06 171 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 RGS5O15539 181 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 SAP30O75446 220 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 SPNP16150 400 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 VDAC1P21796 283 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 ZP1P60852 638 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 ZNF616Q08AN1 781 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 RSU1Q15404 277 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 METTL9Q9H1A3 318 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 GHRLQ9UBU3 117 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 A3GALT2U3KPV4 340 aa13.41□□□□□ -0.26
TOP3A-202ENST00000461127 OR2H2O95918 312 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 IGHG4P01861 327 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 BCL3P20749 454 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 S100A5P33763 92 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 NPBWR2P48146 333 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 SCAND1P57086 179 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 SLC22A6Q4U2R8 563 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 SAXO1Q8IYX7 474 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 SAMD12Q8N8I0 201 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 PXT1Q8NFP0 134 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 OR6Q1Q8NGQ2 317 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 OR1N2Q8NGR9 330 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 NXF2Q9GZY0 626 aaKnown RBP13.4□□□□□ -0.26
TOP3A-202ENST00000461127 CST11Q9H112 138 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 OR6C3Q9NZP0 311 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 PEX16Q9Y5Y5 336 aa13.4□□□□□ -0.26
TOP3A-202ENST00000461127 OVOL1O14753 267 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 ZNF780AO75290 641 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-202ENST00000461127 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-202ENST00000461127 KDM4BO94953 1096 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 CSTBP04080 98 aaKnown RBP13.39□□□□□ -0.27
TOP3A-202ENST00000461127 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 GPR176Q14439 515 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 KCNG3Q8TAE7 436 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 KIRREL1Q96J84 757 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 GHITMQ9H3K2 345 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 ADAM30Q9UKF2 790 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 SPATA2Q9UM82 520 aa13.39□□□□□ -0.27
TOP3A-202ENST00000461127 TMEM272A0A1B0GTI8 110 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 KBTBD11-OT1A0A1B0GTJ5 212 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 CTDSP2O14595 271 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 HTR3BO95264 441 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 CSN2P05814 226 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 SERPINA2P20848 420 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 PSMB8P28062 276 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
TOP3A-202ENST00000461127 C17orf58Q2M2W7 97 aa13.38□□□□□ -0.27
TOP3A-202ENST00000461127 UBE2NLQ5JXB2 153 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms