RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 NAPSAO96009 420 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 SOX6P35712 828 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 AQP4P55087 323 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 KRTAP10-11P60412 298 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 CFHR3Q02985 330 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 FOXE3Q13461 319 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 TPBGQ13641 420 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 HMGN3Q15651 99 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 LIPKQ5VXJ0 399 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 C6orf201Q7Z4U5 140 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 OR6M1Q8NGM8 313 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 UFD1Q92890 307 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 RBMXL1Q96E39 390 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 NICN1Q9BSH3 213 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 FAAP24Q9BTP7 215 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 MCRIP2Q9BUT9 160 aaKnown RBP9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 ISYNA1Q9NPH2 558 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 TPRKBQ9Y3C4 175 aa9.27□□□□□ -0.93
SOX2-OT-201ENST00000460739 IGHG4P01861 327 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 IGF1P05019 195 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 RPLP1P05386 114 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 ELANEP08246 267 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 MYF6P23409 242 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 CDX1P47902 265 aaPredicted RBP9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 TRAM1Q15629 374 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 CXorf66Q5JRM2 361 aaPredicted RBP9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 ZNF880Q6PDB4 577 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 TMEM91Q6ZNR0 172 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 ZNF833PQ6ZTB9 187 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 SVOPQ8N4V2 548 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 OR2AK2Q8NG84 335 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 RAX2Q96IS3 184 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 NABP2Q9BQ15 211 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 MRPL20Q9BYC9 149 aaKnown RBP9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 KCNK15Q9H427 330 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 ABRACLQ9P1F3 81 aa9.26□□□□□ -0.93
SOX2-OT-201ENST00000460739 SAA2-SAA4A0A096LPE2 208 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 A0A0A6YYD4 124 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 RGS10O43665 173 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 SAA2P0DJI9 122 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 VDAC1P21796 283 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 BLVRBP30043 206 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 HOXD3P31249 432 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 OR3A3P47888 321 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 ACTBP60709 375 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 MMDQ15546 238 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 FAM71F2Q6NXP2 309 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 MOB1BQ7L9L4 216 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 FAM89BQ8N5H3 189 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 DPF1Q92782 380 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 TMEM203Q969S6 136 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 GFI1Q99684 422 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 CHCHD6Q9BRQ6 235 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 ANKRD60Q9BZ19 345 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 LPAR5Q9H1C0 372 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 RIMS4Q9H426 269 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 STEAP1Q9UHE8 339 aa9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 ZNF107Q9UII5 783 aaPredicted RBP9.25□□□□□ -0.93
SOX2-OT-201ENST00000460739 TRBV6-6A0A0A6YYG2 114 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 WI2-2373I1.2A0A1W2PRP0 233 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 FOXI3A8MTJ6 420 aaPredicted RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 CCL24O00175 119 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 SLC17A2O00624 439 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 SOCS1O15524 211 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 ARL6IP5O75915 188 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 HSMCR30P0CW71 290 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 OR5H8P0DN80 308 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 SLC2A2P11168 524 aaPredicted RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 ARSBP15848 533 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 CPEP16870 476 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 CRHBPP24387 322 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 PSMA1P25786 263 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 PSMB8P28062 276 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 RPS25P62851 125 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 MLLT11Q13015 90 aaPredicted RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 KIR2DS1Q14954 304 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 LCNL1Q6ZST4 164 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 PRSS48Q7RTY5 328 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 NPBQ8NG41 125 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 OR8U1Q8NH10 309 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 IL1F10Q8WWZ1 152 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 RITA1Q96K30 269 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 KCTD7Q96MP8 289 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 DUX3Q96PT4 197 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 ZNF251Q9BRH9 671 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 URM1Q9BTM9 101 aaKnown RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 IFI27L2Q9H2X8 130 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 PLGRKTQ9HBL7 147 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 CHMP1AQ9HD42 196 aaPredicted RBP9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 PLEKHJ1Q9NW61 149 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 PIPOXQ9P0Z9 390 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 HSF4Q9ULV5 492 aa9.24□□□□□ -0.93
SOX2-OT-201ENST00000460739 ITGB1BP1O14713 200 aa9.23□□□□□ -0.93
SOX2-OT-201ENST00000460739 RAB29O14966 203 aa9.23□□□□□ -0.93
SOX2-OT-201ENST00000460739 NBR2O15453 112 aa9.23□□□□□ -0.93
SOX2-OT-201ENST00000460739 NDUFA3O95167 84 aa9.23□□□□□ -0.93
SOX2-OT-201ENST00000460739 CNTFRP26992 372 aa9.23□□□□□ -0.93
SOX2-OT-201ENST00000460739 PPIFP30405 207 aaKnown RBP9.23□□□□□ -0.93
SOX2-OT-201ENST00000460739 P2RY14Q15391 338 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms