RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 Q9N2K0 584 aa13.13□□□□□ -0.31
SMARCD3-204ENST00000460431 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
SMARCD3-204ENST00000460431 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
SMARCD3-204ENST00000460431 MGAT4AQ9UM21 535 aa13.13□□□□□ -0.31
SMARCD3-204ENST00000460431 M0QZK8 103 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 HERPUD1Q15011 391 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 SFXN4Q6P4A7 337 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 KLHDC1Q8N7A1 406 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 IL1F10Q8WWZ1 152 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 ABHD14AQ9BUJ0 271 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 DAPK2Q9UIK4 370 aa13.12□□□□□ -0.31
SMARCD3-204ENST00000460431 MFNGO00587 321 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 TXNL1O43396 289 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 LANCL1O43813 399 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 IGKV1D-33P01593 117 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 IGKV1-33P01594 117 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 LPLP06858 475 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 VSIG10L2P0DP72 767 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 CD1BP29016 333 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 HES1Q14469 280 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 TIMM50Q3ZCQ8 353 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 ABCA11PQ4W5N1 156 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 TGIF2LXQ8IUE1 241 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 IZUMO1Q8IYV9 350 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 LYG1Q8N1E2 194 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 YIPF6Q96EC8 236 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
SMARCD3-204ENST00000460431 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 SCTP09683 121 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 CD3GP09693 182 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 GNB3P16520 340 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 TMEM11P17152 192 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 MXD1Q05195 221 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 HNF4GQ14541 408 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 ATG5Q9H1Y0 275 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 MOB4Q9Y3A3 225 aa13.1□□□□□ -0.31
SMARCD3-204ENST00000460431 SERPINE3A8MV23 424 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 M0QZ24 198 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 ITGB1BP1O14713 200 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 FGF16O43320 207 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 SNRPBP14678 240 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 VDAC2P45880 294 aaPredicted RBP13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 MRPS15P82914 257 aaKnown RBP13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 Q8N6K4 173 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
SMARCD3-204ENST00000460431 A0A075B6Q4 140 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 ZNF736B4DX44 427 aaPredicted RBP13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 AIREO43918 545 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 FCGR3AP08637 254 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 ZBTB25P24278 435 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 CEACAM6P40199 344 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 SCAND1P57086 179 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 ARL6IP1Q15041 203 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 TMEM95Q3KNT9 176 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 ZNF833PQ6ZTB9 187 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 C5orf56Q8N8D9 126 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 LGALS14Q8TCE9 139 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 IFI27L2Q9H2X8 130 aa13.08□□□□□ -0.32
SMARCD3-204ENST00000460431 IGKV1-6A0A0C4DH72 117 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 ST8SIA5O15466 376 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 TMEM127O75204 238 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 PEX14O75381 377 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 MOSP00540 346 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 OR3A3P47888 321 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 DEFA6Q01524 100 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 CDNFQ49AH0 187 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 C11orf44Q8N8P7 122 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 OR4A4PQ8NGN8 299 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 AGMATQ9BSE5 352 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 GHITMQ9H3K2 345 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 PLSCR3Q9NRY6 295 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 PIPOXQ9P0Z9 390 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
SMARCD3-204ENST00000460431 SAA2-SAA4A0A096LPE2 208 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 RAB29O14966 203 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 FABP7O15540 132 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 HSPA12AO43301 675 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 SCGNO76038 276 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 SAA2P0DJI9 122 aaPredicted RBP13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 TGFBR1P36897 503 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 LSAMPQ13449 338 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 ARFRP1Q13795 201 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 KIR2DS1Q14954 304 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 SRSF7Q16629 238 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 IDNKQ5T6J7 187 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 FAM71F2Q6NXP2 309 aa13.06□□□□□ -0.32
SMARCD3-204ENST00000460431 OR5H6Q8NGV6 325 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms