RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 OR5I1Q13606 314 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 P2RY6Q15077 328 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 C1QL2Q7Z5L3 287 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 OR10G8Q8NGN5 311 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 RNF2Q99496 336 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 FAM74A7A6NL05 159 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 PPIHO43447 177 aaKnown RBP12.72□□□□□ -0.37
PTPRU-205ENST00000460170 CD3EP07766 207 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 PMCHP20382 165 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 NPY1RP25929 384 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 POC1AQ8NBT0 407 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 OR4P4Q8NGL7 312 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 VPS25Q9BRG1 176 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
PTPRU-205ENST00000460170 MGST3O14880 152 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 GATCO43716 136 aaKnown RBP12.72□□□□□ -0.37
PTPRU-205ENST00000460170 NPBWR2P48146 333 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 B2MP61769 119 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 TLNRD1Q9H1K6 362 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 RANP62826 216 aaKnown RBP12.72□□□□□ -0.37
PTPRU-205ENST00000460170 PMS2P11Q13670 270 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 TOMM20LQ6UXN7 152 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 KLHDC1Q8N7A1 406 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 OR4F17Q8NGA8 305 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 MS4A10Q96PG2 267 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 AAMDCQ9H7C9 122 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 TUBD1Q9UJT1 453 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 TOX4O94842 621 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 BCL2P10415 239 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 KCNMB1Q16558 191 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 RPEL1Q2QD12 228 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 CYB561D1Q8N8Q1 229 aa12.72□□□□□ -0.37
PTPRU-205ENST00000460170 PRR32B1ATL7 298 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 IGFBP3P17936 291 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-205ENST00000460170 ORM2P19652 201 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 UCP3P55916 312 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 PSG5Q15238 335 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 NFAM1Q8NET5 270 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-205ENST00000460170 OR52M1Q8NGK5 317 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 RSG1Q9BU20 258 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 NPTNQ9Y639 398 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 VWA8A3KMH1 1905 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 BLNKQ8WV28 456 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 GPHA2Q96T91 129 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 PDE6DO43924 150 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 GYPAP02724 150 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 SMIM6P0DI80 62 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.37
PTPRU-205ENST00000460170 SELENOHQ8IZQ5 122 aaKnown RBP12.71□□□□□ -0.37
PTPRU-205ENST00000460170 LYRM2Q9NU23 88 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-205ENST00000460170 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-205ENST00000460170 HEATR5BQ9P2D3 2071 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 TRPM7Q96QT4 1865 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 A0A1B0GTI1 187 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 NKX2-8O15522 239 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 HPRT1P00492 218 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 TMEM187Q14656 261 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 RTTNQ86VV8 2226 aa12.71□□□□□ -0.38
PTPRU-205ENST00000460170 NPIPB7O75200 414 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 CLDN14O95500 239 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 RFPL3SP0C7P2 107 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 TNXAQ16473 311 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF826PQ6ZT77 177 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 GPR146Q96CH1 333 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 HARBI1Q96MB7 349 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 NOL4LQ96MY1 436 aaPredicted RBP12.7□□□□□ -0.38
PTPRU-205ENST00000460170 PRR33A8MZF0 331 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 C16orf97H3BN30 126 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF880Q6PDB4 577 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 TEPPQ6URK8 271 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 TGIF2LYQ8IUE0 185 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 TCTEX1D1Q8N7M0 179 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 POM121Q96HA1 1249 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 VAMP8Q9BV40 100 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 RTN4RQ9BZR6 473 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 A0A087WV48 116 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
PTPRU-205ENST00000460170 ZNF708P17019 499 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 CEACAM3P40198 252 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 RND1Q92730 232 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 SNX22Q96L94 193 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 IL17BQ9UHF5 180 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 Q56UQ5 140 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 SLC25A53Q5H9E4 307 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 WDR73Q6P4I2 378 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 RAB1CQ92928 201 aa12.7□□□□□ -0.38
PTPRU-205ENST00000460170 FLYWCH2Q96CP2 140 aaKnown RBP12.7□□□□□ -0.38
PTPRU-205ENST00000460170 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
PTPRU-205ENST00000460170 ZIC3O60481 467 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 TM2D1Q9BX74 207 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 MS4A5Q9H3V2 200 aa12.69□□□□□ -0.38
PTPRU-205ENST00000460170 CNOT1A5YKK6 2376 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms