RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 LYG1Q8N1E2 194 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 RTN4IP1Q8WWV3 396 aaPredicted RBP12.94□□□□□ -0.34
CD28-203ENST00000458610 EDARADDQ8WWZ3 215 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 ST6GALNAC6Q969X2 333 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
CD28-203ENST00000458610 A0A075B6Q4 140 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 MFNGO00587 321 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 ITGB1BP1O14713 200 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 SNRNP70P08621 437 aaKnown RBP12.93□□□□□ -0.34
CD28-203ENST00000458610 CLEC2LP0C7M8 214 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 SNRPBP14678 240 aaKnown RBP12.93□□□□□ -0.34
CD28-203ENST00000458610 GNB3P16520 340 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 TMEM11P17152 192 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 CEACAM6P40199 344 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 DIAPH2-AS1Q14236 149 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 HABP2Q14520 560 aaPredicted RBP12.93□□□□□ -0.34
CD28-203ENST00000458610 SRSF7Q16629 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
CD28-203ENST00000458610 MOGAT2Q3SYC2 334 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 CDNFQ49AH0 187 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 OR4A4PQ8NGN8 299 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 OR2T10Q8NGZ9 312 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 CFHR4Q92496 578 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 HDHD3Q9BSH5 251 aaPredicted RBP12.93□□□□□ -0.34
CD28-203ENST00000458610 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.93□□□□□ -0.34
CD28-203ENST00000458610 PIPOXQ9P0Z9 390 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 KCNK7Q9Y2U2 307 aa12.93□□□□□ -0.34
CD28-203ENST00000458610 A0A0A6YYH2 397 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 A6NJ64 397 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 SLC31A2O15432 143 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 DIRAS3O95661 229 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 IGKV1D-33P01593 117 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 IGKV1-33P01594 117 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 GSTP1P09211 210 aaKnown RBP12.92□□□□□ -0.34
CD28-203ENST00000458610 REG1BP48304 166 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 BLCAPP62952 87 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 EBI3Q14213 229 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 GNMTQ14749 295 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 FAM53AQ6NSI3 398 aaPredicted RBP12.92□□□□□ -0.34
CD28-203ENST00000458610 IZUMO1Q8IYV9 350 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 LGALS14Q8TCE9 139 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 S1PR3Q99500 378 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 CITED1Q99966 193 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 ZNF702PQ9H963 129 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 DIABLOQ9NR28 239 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 RHBDL2Q9NX52 303 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 SLC23A1Q9UHI7 598 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 MOB4Q9Y3A3 225 aa12.92□□□□□ -0.34
CD28-203ENST00000458610 RAB29O14966 203 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 FABP7O15540 132 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 FGF16O43320 207 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 FCGR3AP08637 254 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 SCTP09683 121 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 LSM3P62310 102 aaKnown RBP12.91□□□□□ -0.34
CD28-203ENST00000458610 HERPUD1Q15011 391 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 PNLIPRP3Q17RR3 467 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 HACD4Q5VWC8 232 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 FAM71F2Q6NXP2 309 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 OR8H1Q8NGG4 311 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 OR13F1Q8NGS4 319 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 CYYR1Q96J86 154 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 FUNDC2Q9BWH2 189 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 MRPS26Q9BYN8 205 aaKnown RBP12.91□□□□□ -0.34
CD28-203ENST00000458610 DCSTAMPQ9H295 470 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 SPATA2Q9UM82 520 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
CD28-203ENST00000458610 M0QZ24 198 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 MOSP00540 346 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 DTYMKP23919 212 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 RPS19P39019 145 aaKnown RBP12.9□□□□□ -0.34
CD28-203ENST00000458610 VDAC2P45880 294 aaPredicted RBP12.9□□□□□ -0.34
CD28-203ENST00000458610 HNF4GQ14541 408 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 ABCA11PQ4W5N1 156 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 Q6ZPA2 131 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 Q6ZS49 121 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 C5orf24Q7Z6I8 188 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 OR10J5Q8NHC4 309 aa12.9□□□□□ -0.34
CD28-203ENST00000458610 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
CD28-203ENST00000458610 EAF1Q96JC9 268 aaPredicted RBP12.9□□□□□ -0.34
CD28-203ENST00000458610 NCBP2LA6PVI3 153 aaKnown RBP12.89□□□□□ -0.35
CD28-203ENST00000458610 CTXN2P0C2S0 81 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 VSIG10L2P0DP72 767 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 GNG2P59768 71 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 KLHDC1Q8N7A1 406 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 S100A16Q96FQ6 103 aaKnown RBP12.89□□□□□ -0.35
CD28-203ENST00000458610 SERTAD4Q9NUC0 356 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 ZNF221Q9UK13 617 aa12.89□□□□□ -0.35
CD28-203ENST00000458610 IGHV3-72A0A0B4J1Y9 119 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 MC5RP33032 325 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 C9orf152Q5JTZ5 239 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 PRR31Q5SQ13 230 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 ANKRD13BQ86YJ7 626 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 OR5H6Q8NGV6 325 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 GINS4Q9BRT9 223 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 TOLLIPQ9H0E2 274 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 C11orf54Q9H0W9 315 aaPredicted RBP12.88□□□□□ -0.35
CD28-203ENST00000458610 IFI27L2Q9H2X8 130 aa12.88□□□□□ -0.35
CD28-203ENST00000458610 TRAV18A0A075B6X5 111 aa12.87□□□□□ -0.35
CD28-203ENST00000458610 ST8SIA5O15466 376 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms