RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 MS4A15Q8N5U1 240 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 OR8U1Q8NH10 309 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 SETD6Q8TBK2 473 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 CYYR1Q96J86 154 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 HSPB9Q9BQS6 159 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 TPRKBQ9Y3C4 175 aa12.37□□□□□ -0.43
CHCHD3-204ENST00000457942 CCL24O00175 119 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 EGFEM1PQ0D2K5 195 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 FOXE3Q13461 319 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 MED22Q15528 200 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 HSD17B12Q53GQ0 312 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 STEAP3Q658P3 488 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 ZNF554Q86TJ5 538 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 LYPD6Q86Y78 171 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 FAM71E2Q8N5Q1 922 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 IL1F10Q8WWZ1 152 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 GALMQ96C23 342 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 RAX2Q96IS3 184 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 P2RX4Q99571 388 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 PLSCR3Q9NRY6 295 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 MBNL3Q9NUK0 354 aaKnown RBP12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 RAB26Q9ULW5 256 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 SACSQ9NZJ4 4579 aa12.36□□□□□ -0.43
CHCHD3-204ENST00000457942 RGS10O43665 173 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 ELANEP08246 267 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 CRHBPP24387 322 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 C6orf201Q7Z4U5 140 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 CEACAM19Q7Z692 300 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 C5orf24Q7Z6I8 188 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 PHYHIPQ92561 330 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 SULT4A1Q9BR01 284 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 FAAP24Q9BTP7 215 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 ZMAT5Q9UDW3 170 aaKnown RBP12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 STEAP1Q9UHE8 339 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 LSM2Q9Y333 95 aaKnown RBP12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 U3KQK5 164 aa12.35□□□□□ -0.43
CHCHD3-204ENST00000457942 HSMCR30P0CW71 290 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 OR5H8P0DN80 308 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 CHATP28329 748 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 HTR2CP28335 458 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 OR3A3P47888 321 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 GP2P55259 537 aaKnown RBP12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 ACTBP60709 375 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 HTD2P86397 168 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 IRF3Q14653 427 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 SPHARQ15513 63 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 OR5M8Q8NGP6 311 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 KCNG3Q8TAE7 436 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 UFD1Q92890 307 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 KCTD7Q96MP8 289 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 NICN1Q9BSH3 213 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 DUSP21Q9H596 190 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 PARP11Q9NR21 331 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 KIAA1456Q9P272 454 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 LRRC42Q9Y546 428 aa12.34□□□□□ -0.43
CHCHD3-204ENST00000457942 TENM2Q9NT68 2774 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 NBR2O15453 112 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 YPEL1O60688 119 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 SRMP19623 302 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 DGCR2P98153 550 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 DCTN2Q13561 401 aaKnown RBP12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 HMGN3Q15651 99 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 LIPKQ5VXJ0 399 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 YPEL2Q96QA6 119 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 PLGRKTQ9HBL7 147 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
CHCHD3-204ENST00000457942 STAB2Q8WWQ8 2551 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 IGHG4P01861 327 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 CNTFRP26992 372 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 BLVRBP30043 206 aaPredicted RBP12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 CFHR3Q02985 330 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 KIR2DS1Q14954 304 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 PLGLAQ15195 96 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 C1orf100Q5SVJ3 147 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 ZNF833PQ6ZTB9 187 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 MOB1BQ7L9L4 216 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 ODF3L1Q8IXM7 274 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 SVOPQ8N4V2 548 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 OR6M1Q8NGM8 313 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 C4orf3Q8WVX3 66 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 TMEM203Q969S6 136 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 ASCL2Q99929 193 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 PLEKHJ1Q9NW61 149 aa12.32□□□□□ -0.44
CHCHD3-204ENST00000457942 ATP6V0E1O15342 81 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms