RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 DTYMKP23919 212 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 PPP1CCP36873 323 aaKnown RBP8.1□□□□□ -1.11
ATG4A-206ENST00000457035 GNG10P50151 68 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 RAB13P51153 203 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 DYNLT3P51808 116 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 HLA-DRB3P79483 266 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 MRPS15P82914 257 aaKnown RBP8.1□□□□□ -1.11
ATG4A-206ENST00000457035 PITPNAQ00169 270 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 DIAPH2-AS1Q14236 149 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 GNMTQ14749 295 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 MZT2AQ6P582 158 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 IZUMO1Q8IYV9 350 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 DTX3Q8N9I9 347 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 OR10V1Q8NGI7 309 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 NUDCD2Q8WVJ2 157 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 MAFIPQ8WZ33 124 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 ST6GALNAC6Q969X2 333 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 PHF21AQ96BD5 680 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 TNFRSF19Q9NS68 423 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 JPT1Q9UK76 154 aa8.1□□□□□ -1.11
ATG4A-206ENST00000457035 OOSP1A8MZH6 123 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 H3BUX3 64 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 FABP7O15540 132 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 HLA-DQB1P01920 261 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 PTHLHP12272 177 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 ELK1P19419 428 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 TALDO1P37837 337 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 CEACAM3P40198 252 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 CEACAM6P40199 344 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 MADCAM1Q13477 382 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 HERPUD1Q15011 391 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 IGSF11Q5DX21 431 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 TPTE2P1Q5T6R2 138 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 OR4A4PQ8NGN8 299 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 OR10X1Q8NGY0 326 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 OR5R1Q8NH85 324 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 IL1F10Q8WWZ1 152 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 AP3S1Q92572 193 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 AGMATQ9BSE5 352 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 ST6GALNAC5Q9BVH7 336 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 TOLLIPQ9H0E2 274 aa8.09□□□□□ -1.11
ATG4A-206ENST00000457035 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 TRBV6-7A0A0A0MS04 114 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 FAM90A9PA6NNJ1 464 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 ZNF701M0R085 212 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 CTDSP2O14595 271 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 ITGB1BP1O14713 200 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 RGS11O94810 467 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 DIRAS3O95661 229 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 ZBTB25P24278 435 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 SOX6P35712 828 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 KIR2DS4P43632 304 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 ZNF137PP52743 207 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 TAS2R20P59543 309 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 GNG2P59768 71 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 KIR2DS1Q14954 304 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 PLA1AQ53H76 456 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 CCBE1Q6UXH8 406 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 ODF3L1Q8IXM7 274 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 CABLES2Q9BTV7 478 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 SLIRPQ9GZT3 109 aaKnown RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 PARP12Q9H0J9 701 aaKnown RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 C11orf54Q9H0W9 315 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 MIXL1Q9H2W2 232 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 CCDC59Q9P031 241 aaKnown RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 OR1A1Q9P1Q5 309 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 SLC23A1Q9UHI7 598 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 VPREB3Q9UKI3 123 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 AMMECR1Q9Y4X0 333 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-206ENST00000457035 TNCP24821 2201 aa8.08□□□□□ -1.12
ATG4A-206ENST00000457035 SMIM31A0A1B0GVY4 71 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 A0A1W2PPI3 338 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 A6NDX4 124 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 GPR137BO60478 399 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 NOL3O60936 208 aaKnown RBP8.07□□□□□ -1.12
ATG4A-206ENST00000457035 GAPDHP04406 335 aaKnown RBP8.07□□□□□ -1.12
ATG4A-206ENST00000457035 CD33P20138 364 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 MNDAP41218 407 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 RAB7AP51149 207 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 ZNF816Q0VGE8 651 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-206ENST00000457035 LY6EQ16553 131 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 TMEM69Q5SWH9 247 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 CCDC144NLQ6NUI1 221 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 HOGA1Q86XE5 327 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 GVQW1Q8N7I0 195 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 CFHR4Q92496 578 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATG4A-206ENST00000457035 TOMM40LQ969M1 308 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 RPEQ96AT9 228 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 ABHD14AQ9BUJ0 271 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 NXF2Q9GZY0 626 aaKnown RBP8.07□□□□□ -1.12
ATG4A-206ENST00000457035 RSL24D1Q9UHA3 163 aaKnown RBP8.07□□□□□ -1.12
ATG4A-206ENST00000457035 TCF19Q9Y242 345 aa8.07□□□□□ -1.12
ATG4A-206ENST00000457035 IGHV1-3A0A0C4DH29 117 aa8.06□□□□□ -1.12
ATG4A-206ENST00000457035 TMEM89A2RUT3 159 aa8.06□□□□□ -1.12
ATG4A-206ENST00000457035 DPPA5A6NC42 116 aa8.06□□□□□ -1.12
ATG4A-206ENST00000457035 BTBD17A6NE02 478 aa8.06□□□□□ -1.12
ATG4A-206ENST00000457035 CCDC160A6NGH7 325 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms