RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PRDX4Q13162 271 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 CMTM1Q8IZ96 169 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 MEGF10Q96KG7 1140 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
LINC00959-201ENST00000456581 ZNF665Q9H7R5 613 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 IFNA17P01571 189 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 TK1P04183 234 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 PSG2P11465 335 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 DEFA4P12838 97 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 FABP4P15090 132 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 RAB5CP51148 216 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 RAB11AP62491 216 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 ARL16Q0P5N6 197 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 ZNF266Q14584 549 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 WDR25Q64LD2 544 aaPredicted RBP10.53□□□□□ -0.72
LINC00959-201ENST00000456581 BEND4Q6ZU67 534 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 MRPL21Q7Z2W9 205 aaKnown RBP10.53□□□□□ -0.72
LINC00959-201ENST00000456581 MDP1Q86V88 176 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 FAM122AQ96E09 287 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 TRIB1Q96RU8 372 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 Q9N2K0 584 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 OR1A1Q9P1Q5 309 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 RAB2AP61019 212 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 FBXW9Q5XUX1 488 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 TMEM211Q6ICI0 200 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 CLDND2Q8NHS1 167 aa10.53□□□□□ -0.72
LINC00959-201ENST00000456581 ZNF732B4DXR9 585 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 CDS2O95674 445 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 TRGC1P0CF51 173 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 PGA5P0DJD9 388 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 SELEP16581 610 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
LINC00959-201ENST00000456581 CD82P27701 267 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 UCP3P55916 312 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 SLC25A24Q6NUK1 477 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 CNEP1R1Q8N9A8 125 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 TMEM56Q96MV1 263 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 DLL3Q9NYJ7 618 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 TMEM56-RWDD3S4R434 201 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 METTL15P1P0C7V9 234 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 PMELP40967 661 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 CDX1P47902 265 aaPredicted RBP10.52□□□□□ -0.73
LINC00959-201ENST00000456581 ERVS71-1P61550 626 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 PLP2Q04941 152 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 NRN1LQ496H8 165 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 MALSU1Q96EH3 234 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 RNF115Q9Y4L5 304 aa10.52□□□□□ -0.73
LINC00959-201ENST00000456581 KALRNO60229 2985 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
LINC00959-201ENST00000456581 RHBDL1O75783 438 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 ZNF726P1Q15940 193 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 OR2T2Q6IF00 324 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 NECAP1Q8NC96 275 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 BCL2L2Q92843 193 aaPredicted RBP10.51□□□□□ -0.73
LINC00959-201ENST00000456581 GPR146Q96CH1 333 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 C14orf144Q96I85 54 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 WFIKKN1Q96NZ8 548 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 TAAR6Q96RI8 345 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 KIAA1456Q9P272 454 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 ERRFI1Q9UJM3 462 aaPredicted RBP10.51□□□□□ -0.73
LINC00959-201ENST00000456581 PPP1R3CQ9UQK1 317 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 K7EM74 188 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 NAPSAO96009 420 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 ELLP55199 621 aaPredicted RBP10.51□□□□□ -0.73
LINC00959-201ENST00000456581 ID3Q02535 119 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 FOXF2Q12947 444 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 SP5Q6BEB4 398 aaPredicted RBP10.51□□□□□ -0.73
LINC00959-201ENST00000456581 VWA1Q6PCB0 445 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 ZNF610Q8N9Z0 462 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 LFNGQ8NES3 379 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 APOBEC3DQ96AK3 386 aaPredicted RBP10.51□□□□□ -0.73
LINC00959-201ENST00000456581 SNX22Q96L94 193 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 RPRMQ9NS64 109 aa10.51□□□□□ -0.73
LINC00959-201ENST00000456581 PTPRQQ9UMZ3 2332 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
LINC00959-201ENST00000456581 CNOT4O95628 575 aaKnown RBP10.5□□□□□ -0.73
LINC00959-201ENST00000456581 IGHV1-2P23083 117 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 ARR3P36575 388 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 IDH3GP51553 393 aaPredicted RBP10.5□□□□□ -0.73
LINC00959-201ENST00000456581 RNASE11Q8TAA1 199 aaKnown RBP10.5□□□□□ -0.73
LINC00959-201ENST00000456581 RBMXL1Q96E39 390 aaKnown RBP10.5□□□□□ -0.73
LINC00959-201ENST00000456581 NIPSNAP3BQ9BS92 247 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 GAR1Q9NY12 217 aaKnown RBP10.5□□□□□ -0.73
LINC00959-201ENST00000456581 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 CD300LBA8K4G0 201 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 ALKBH6Q3KRA9 238 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 PCSK4Q6UW60 755 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 ATRXP46100 2492 aa10.5□□□□□ -0.73
LINC00959-201ENST00000456581 ZNF729A6NN14 1252 aaPredicted RBP10.49□□□□□ -0.73
LINC00959-201ENST00000456581 HSPA12AO43301 675 aa10.49□□□□□ -0.73
LINC00959-201ENST00000456581 IGKV1-39P01597 117 aa10.49□□□□□ -0.73
LINC00959-201ENST00000456581 IGKV1D-39P04432 117 aa10.49□□□□□ -0.73
LINC00959-201ENST00000456581 VDAC1P21796 283 aa10.49□□□□□ -0.73
LINC00959-201ENST00000456581 BMP5P22003 454 aa10.49□□□□□ -0.73
LINC00959-201ENST00000456581 APLNRP35414 380 aa10.49□□□□□ -0.73
LINC00959-201ENST00000456581 HIST3H2BBQ8N257 126 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms