RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 OR11H1Q8NG94 326 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 ABHD14AQ9BUJ0 271 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 ANKRD60Q9BZ19 345 aa12.46□□□□□ -0.41
GPC1-206ENST00000455111 ALX4Q9H161 411 aaPredicted RBP12.46□□□□□ -0.41
GPC1-206ENST00000455111 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
GPC1-206ENST00000455111 CD37P11049 281 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 CAPGP40121 348 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 WNT4P56705 351 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 QRFPP83859 136 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 MMDQ15546 238 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 TMEM30BQ3MIR4 351 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 STEAP3Q658P3 488 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 AHSA2Q719I0 299 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 C10orf67Q8IYJ2 551 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 OR5M8Q8NGP6 311 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 GFI1Q99684 422 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 TPSG1Q9NRR2 321 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 PLCXD1Q9NUJ7 323 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
GPC1-206ENST00000455111 CKLFQ9UBR5 152 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 JPT1Q9UK76 154 aa12.45□□□□□ -0.42
GPC1-206ENST00000455111 SEC14L6B5MCN3 397 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 YPEL1O60688 119 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 PROP1O75360 226 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 CA11O75493 328 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 NDUFA3O95167 84 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 HLA-DRB1P01911 266 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 GLAP06280 429 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 EGR2P11161 476 aaPredicted RBP12.44□□□□□ -0.42
GPC1-206ENST00000455111 VDAC1P21796 283 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 HTR2CP28335 458 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 BLVRBP30043 206 aaPredicted RBP12.44□□□□□ -0.42
GPC1-206ENST00000455111 ECI1P42126 302 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 HTD2P86397 168 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 LY6G6FQ5SQ64 297 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 C9orf66Q5T8R8 295 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 ZNF880Q6PDB4 577 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 DHRSXQ8N5I4 330 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 PACRGLQ8N7B6 248 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 MINDY2Q8NBR6 621 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 CASTOR1Q8WTX7 329 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 OR5B12Q96R08 314 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 ASCL2Q99929 193 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 FAAP24Q9BTP7 215 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 OR51J1Q9H342 316 aa12.44□□□□□ -0.42
GPC1-206ENST00000455111 LSM2Q9Y333 95 aaKnown RBP12.44□□□□□ -0.42
GPC1-206ENST00000455111 FCN1O00602 326 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 RAMP3O60896 148 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 NAPSAO96009 420 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 RPL39P5Q59GN2 51 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 C1orf100Q5SVJ3 147 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 OGFRL1Q5TC84 451 aaPredicted RBP12.43□□□□□ -0.42
GPC1-206ENST00000455111 TRAT1Q6PIZ9 186 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 SETD9Q8NE22 299 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 NPBQ8NG41 125 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 UBE2E2Q96LR5 201 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 UQCC2Q9BRT2 126 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 GON7Q9BXV9 100 aa12.43□□□□□ -0.42
GPC1-206ENST00000455111 FOXI3A8MTJ6 420 aaPredicted RBP12.42□□□□□ -0.42
GPC1-206ENST00000455111 TMEM14DPA8MWL7 114 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 NBR2O15453 112 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
GPC1-206ENST00000455111 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 LINC00205P59089 165 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 TAS2R43P59537 309 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 RPS27AP62979 156 aaKnown RBP12.42□□□□□ -0.42
GPC1-206ENST00000455111 RUNX1Q01196 453 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 C5orf64Q2M2E5 130 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 ZNF260Q3ZCT1 412 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 ACSM3Q53FZ2 586 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 GLDNQ6ZMI3 551 aaPredicted RBP12.42□□□□□ -0.42
GPC1-206ENST00000455111 ZNF554Q86TJ5 538 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 NKAIN3Q8N8D7 197 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 BPIFB6Q8NFQ5 453 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 OR1N2Q8NGR9 330 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 AGMATQ9BSE5 352 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 HDHD3Q9BSH5 251 aaPredicted RBP12.42□□□□□ -0.42
GPC1-206ENST00000455111 TM2D1Q9BX74 207 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
GPC1-206ENST00000455111 GAB2Q9UQC2 676 aa12.42□□□□□ -0.42
GPC1-206ENST00000455111 STARD9Q9P2P6 4700 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 RAB9AP51151 201 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
GPC1-206ENST00000455111 RCN1Q15293 331 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 FAM131AQ6UXB0 335 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 FBXL15Q9H469 300 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.41□□□□□ -0.42
GPC1-206ENST00000455111 U3KQK5 164 aa12.41□□□□□ -0.42
GPC1-206ENST00000455111 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 EBAG9O00559 213 aa12.4□□□□□ -0.42
GPC1-206ENST00000455111 MYL12BO14950 172 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms