RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 NR2C2APQ86WQ0 139 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 TGIF2LXQ8IUE1 241 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 Q8N9W7 124 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 GALMQ96C23 342 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 HDHD3Q9BSH5 251 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-207ENST00000453796 ABHD14AQ9BUJ0 271 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 PLSCR3Q9NRY6 295 aa11.54□□□□□ -0.56
HSPG2-207ENST00000453796 IFITM5A6NNB3 132 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 PDCD5O14737 125 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 IGHG2P01859 326 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 RANBP1P43487 201 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 PLAC9Q5JTB6 97 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 C9orf152Q5JTZ5 239 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 MOB1BQ7L9L4 216 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 FCGR1BQ92637 280 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
HSPG2-207ENST00000453796 ARHGAP5-AS1Q96IT6 56 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 PECRQ9BY49 303 aa11.53□□□□□ -0.56
HSPG2-207ENST00000453796 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-207ENST00000453796 RGS11O94810 467 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 MOSP00540 346 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 RAB3BP20337 219 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 MYL9P24844 172 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 PSMB9P28065 219 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 FGF9P31371 208 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-207ENST00000453796 LSAMPQ13449 338 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 C22orf42Q6IC83 251 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 OR56B1Q8NGI3 324 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 CHMP1AQ9HD42 196 aaPredicted RBP11.52□□□□□ -0.57
HSPG2-207ENST00000453796 Q9N2K0 584 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 TXNL4BQ9NX01 149 aaKnown RBP11.52□□□□□ -0.57
HSPG2-207ENST00000453796 ABRACLQ9P1F3 81 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 RAB22AQ9UL26 194 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 KCNK7Q9Y2U2 307 aa11.52□□□□□ -0.57
HSPG2-207ENST00000453796 RRP15Q9Y3B9 282 aaKnown RBP11.52□□□□□ -0.57
HSPG2-207ENST00000453796 PRKDCP78527 4128 aaKnown RBP11.52□□□□□ -0.57
HSPG2-207ENST00000453796 HLA-DRB3P79483 266 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 MOGAT2Q3SYC2 334 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 ZNF773Q6PK81 442 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 IL1F10Q8WWZ1 152 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 R3HDM4Q96D70 268 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 NOL4LQ96MY1 436 aaPredicted RBP11.51□□□□□ -0.57
HSPG2-207ENST00000453796 NABP2Q9BQ15 211 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 ZNF251Q9BRH9 671 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 PARP12Q9H0J9 701 aaKnown RBP11.51□□□□□ -0.57
HSPG2-207ENST00000453796 ABCG5Q9H222 651 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 C12orf4Q9NQ89 552 aa11.51□□□□□ -0.57
HSPG2-207ENST00000453796 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
HSPG2-207ENST00000453796 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 A0A0B4J203 849 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 LINC01548A6NM66 108 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 ITGB1BP1O14713 200 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 SAA2P0DJI9 122 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-207ENST00000453796 RAB6AP20340 208 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 F2RL1P55085 397 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 SAMD5Q5TGI4 173 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 SLC35E3Q7Z769 313 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 OR4F17Q8NGA8 305 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 OR8H1Q8NGG4 311 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 OR4F4Q96R69 305 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 S1PR3Q99500 378 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 CMSS1Q9BQ75 279 aaKnown RBP11.5□□□□□ -0.57
HSPG2-207ENST00000453796 AGMATQ9BSE5 352 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 MRPL20Q9BYC9 149 aaKnown RBP11.5□□□□□ -0.57
HSPG2-207ENST00000453796 MGAT4AQ9UM21 535 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 STUB1Q9UNE7 303 aa11.5□□□□□ -0.57
HSPG2-207ENST00000453796 TSSC4Q9Y5U2 329 aaPredicted RBP11.5□□□□□ -0.57
HSPG2-207ENST00000453796 IGKV1-6A0A0C4DH72 117 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 PSMB11A5LHX3 300 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
HSPG2-207ENST00000453796 G3V4G9 280 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 RAB27BO00194 218 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 ST8SIA5O15466 376 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 SCTP09683 121 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 OR3A3P47888 321 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 KCTD21Q4G0X4 260 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 PDLIM3Q53GG5 364 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-207ENST00000453796 FAM71F2Q6NXP2 309 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 C1QL4Q86Z23 238 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 OR2AK2Q8NG84 335 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 OR10R2Q8NGX6 335 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 CHPT1Q8WUD6 406 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 PTX4Q96A99 478 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 OR1A1Q9P1Q5 309 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 SLC23A1Q9UHI7 598 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
HSPG2-207ENST00000453796 NOTCH3Q9UM47 2321 aa11.48□□□□□ -0.57
HSPG2-207ENST00000453796 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
HSPG2-207ENST00000453796 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
HSPG2-207ENST00000453796 SMIM30A4D0T7 59 aa11.48□□□□□ -0.57
HSPG2-207ENST00000453796 SERPINE3A8MV23 424 aa11.48□□□□□ -0.57
HSPG2-207ENST00000453796 MFNGO00587 321 aa11.48□□□□□ -0.57
HSPG2-207ENST00000453796 SLC2A2P11168 524 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-207ENST00000453796 GPR12P47775 334 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms