RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SLC25A38Q96DW6 304 aa16■□□□□ 0.15
COL9A3-202ENST00000452372 NAA50Q9GZZ1 169 aaKnown RBP16■□□□□ 0.15
COL9A3-202ENST00000452372 C16orf95Q9H693 158 aa16■□□□□ 0.15
COL9A3-202ENST00000452372 A0A1W2PPI3 338 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 CLPSL1A2RUU4 121 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 FAM90A9PA6NNJ1 464 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 TRDCB7Z8K6 153 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 HSD17B6O14756 317 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 GABARAPO95166 117 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 GSTP1P09211 210 aaKnown RBP15.99■□□□□ 0.15
COL9A3-202ENST00000452372 SCTP09683 121 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 CD24P25063 80 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 ZNF137PP52743 207 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 ARFRP1Q13795 201 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 GPR107Q5VW38 600 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 TMEM219Q86XT9 240 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 LINC01006Q8NI28 216 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 NOTCH1P46531 2555 aa15.99■□□□□ 0.15
COL9A3-202ENST00000452372 TGP01266 2768 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 A0A0A6YYH2 397 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 A6NJ64 397 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 FCGR3AP08637 254 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 TALDO1P37837 337 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 ZNF260Q3ZCT1 412 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 HACD4Q5VWC8 232 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 THNSL2Q86YJ6 484 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 DRAM1Q8N682 238 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 CFHR4Q92496 578 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 PHF21AQ96BD5 680 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 ABHD14AQ9BUJ0 271 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 NPFFR1Q9GZQ6 430 aa15.98■□□□□ 0.15
COL9A3-202ENST00000452372 RANBP3Q9H6Z4 567 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-202ENST00000452372 ELF5Q9UKW6 265 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-202ENST00000452372 TIMM23O14925 209 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 FAM106CPP0CH98 169 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 ZBTB25P24278 435 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 KIR2DS4P43632 304 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 SRSF4Q08170 494 aaKnown RBP15.97■□□□□ 0.15
COL9A3-202ENST00000452372 HABP2Q14520 560 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-202ENST00000452372 SRSF7Q16629 238 aaKnown RBP eCLIP15.97■□□□□ 0.15
COL9A3-202ENST00000452372 OR2AK2Q8NG84 335 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 OR4A4PQ8NGN8 299 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 CAPSLQ8WWF8 208 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 RTN4IP1Q8WWV3 396 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-202ENST00000452372 KCTD12Q96CX2 325 aaKnown RBP15.97■□□□□ 0.15
COL9A3-202ENST00000452372 ABCG5Q9H222 651 aa15.97■□□□□ 0.15
COL9A3-202ENST00000452372 ZNF230Q9UIE0 474 aaPredicted RBP15.97■□□□□ 0.15
COL9A3-202ENST00000452372 IGHV1-3A0A0C4DH29 117 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 DTYMKP23919 212 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 REG1BP48304 166 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 PITPNAQ00169 270 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 KIR2DS1Q14954 304 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 PNLIPRP3Q17RR3 467 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 Q6ZS49 121 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 C16orf82Q7Z2V1 217 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 LYG1Q8N1E2 194 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 DTX3Q8N9I9 347 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 OR4C13Q8NGP0 309 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 OR56B4Q8NH76 319 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 DIABLOQ9NR28 239 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 SLC23A1Q9UHI7 598 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 RNF114Q9Y508 228 aa15.96■□□□□ 0.15
COL9A3-202ENST00000452372 TRAV18A0A075B6X5 111 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 IGKV1-6A0A0C4DH72 117 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 ITGB1BP1O14713 200 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 FABP7O15540 132 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 HSPA12AO43301 675 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 TXNL1O43396 289 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 OR2F2O95006 317 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 LPLP06858 475 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 GSTT2P0CG29 244 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 GSTT2BP0CG30 244 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 CEACAM6P40199 344 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 RPL5P46777 297 aaKnown RBP15.95■□□□□ 0.14
COL9A3-202ENST00000452372 FBLN7Q53RD9 439 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 TREML4Q6UXN2 200 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 MOB3BQ86TA1 216 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 TGIF2LXQ8IUE1 241 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 ODF3L1Q8IXM7 274 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 S100A16Q96FQ6 103 aaKnown RBP15.95■□□□□ 0.14
COL9A3-202ENST00000452372 RBM14Q96PK6 669 aaKnown RBP15.95■□□□□ 0.14
COL9A3-202ENST00000452372 OR1A1Q9P1Q5 309 aa15.95■□□□□ 0.14
COL9A3-202ENST00000452372 TMEM235A6NFC5 223 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 LANCL1O43813 399 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 DIRAS3O95661 229 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 SNRNP70P08621 437 aaKnown RBP15.94■□□□□ 0.14
COL9A3-202ENST00000452372 RORCP51449 518 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 KRTAP10-3P60369 221 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 HERPUD1Q15011 391 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 UBE2NLQ5JXB2 153 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 SAMD12Q8N8I0 201 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 EDARADDQ8WWZ3 215 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 MAFIPQ8WZ33 124 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 AKR1E2Q96JD6 320 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 SLC25A33Q9BSK2 321 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 DCSTAMPQ9H295 470 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 GHITMQ9H3K2 345 aa15.94■□□□□ 0.14
COL9A3-202ENST00000452372 XRCC3O43542 346 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 PROK1P58294 105 aa15.93■□□□□ 0.14
COL9A3-202ENST00000452372 GNG2P59768 71 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms