RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TMEM203Q969S6 136 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 HSPB9Q9BQS6 159 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 FAAP24Q9BTP7 215 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 ISYNA1Q9NPH2 558 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 BATF3Q9NR55 127 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 ZFP57Q9NU63 452 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 TPRKBQ9Y3C4 175 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 RGS10O43665 173 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 YPEL1O60688 119 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 DUS4LO95620 317 aaKnown RBP9.8□□□□□ -0.84
CPSF4-208ENST00000452047 CRHBPP24387 322 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 CFHR3Q02985 330 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 MLLT11Q13015 90 aaPredicted RBP9.8□□□□□ -0.84
CPSF4-208ENST00000452047 ZNF880Q6PDB4 577 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 TEX38Q6PEX7 206 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 RNF152Q8N8N0 203 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 GALMQ96C23 342 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 YPEL2Q96QA6 119 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 P2RX4Q99571 388 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 MRPL20Q9BYC9 149 aaKnown RBP9.8□□□□□ -0.84
CPSF4-208ENST00000452047 LPAR5Q9H1C0 372 aa9.8□□□□□ -0.84
CPSF4-208ENST00000452047 SAA2-SAA4A0A096LPE2 208 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 FOXI3A8MTJ6 420 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-208ENST00000452047 SLC17A2O00624 439 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 HSMCR30P0CW71 290 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 SAA2P0DJI9 122 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-208ENST00000452047 CPEP16870 476 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 BLVRBP30043 206 aaPredicted RBP9.79□□□□□ -0.84
CPSF4-208ENST00000452047 SOX6P35712 828 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 KRTAP10-11P60412 298 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 EGFEM1PQ0D2K5 195 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 TRAM1Q15629 374 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 PRSS48Q7RTY5 328 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 FAM89BQ8N5H3 189 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 RASL11BQ9BPW5 248 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 NABP2Q9BQ15 211 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 IFI27L2Q9H2X8 130 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 LRRC42Q9Y546 428 aa9.79□□□□□ -0.84
CPSF4-208ENST00000452047 TRBV6-6A0A0A6YYG2 114 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 K7EIL1 84 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 SOCS1O15524 211 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 ARL6IP5O75915 188 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 RGS11O94810 467 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 IGHG4P01861 327 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 IGF1P05019 195 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
CPSF4-208ENST00000452047 ARSBP15848 533 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 PSMA1P25786 263 aaKnown RBP9.78□□□□□ -0.84
CPSF4-208ENST00000452047 MYCNOSP40205 109 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 OR3A3P47888 321 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 FABP5Q01469 135 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 FOXE3Q13461 319 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 P2RY14Q15391 338 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 MMDQ15546 238 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 PNLIPRP3Q17RR3 467 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 MOB1BQ7L9L4 216 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 ZNF695Q8IW36 515 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 OR2AK2Q8NG84 335 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 IL1F10Q8WWZ1 152 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 RITA1Q96K30 269 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 MGLLQ99685 303 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 ZNF251Q9BRH9 671 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 GON7Q9BXV9 100 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 PLGRKTQ9HBL7 147 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 PLEKHJ1Q9NW61 149 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 ABRACLQ9P1F3 81 aa9.78□□□□□ -0.84
CPSF4-208ENST00000452047 AK6Q9Y3D8 172 aaKnown RBP9.78□□□□□ -0.84
CPSF4-208ENST00000452047 ST8SIA5O15466 376 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 ELANEP08246 267 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 SLC2A2P11168 524 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 CNTFRP26992 372 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 CALRP27797 417 aaKnown RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 HOXD3P31249 432 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 MAP2K4P45985 399 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 TMEM50BP56557 158 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 ACTBP60709 375 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 TBCEQ15813 527 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 CXorf66Q5JRM2 361 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 FAM71F2Q6NXP2 309 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 IZUMO2Q6UXV1 221 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 RAX2Q96IS3 184 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 DUX3Q96PT4 197 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 HDHD3Q9BSH5 251 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 URM1Q9BTM9 101 aaKnown RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 CCDC90BQ9GZT6 254 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 PARP12Q9H0J9 701 aaKnown RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 VCX3BQ9H321 246 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 RIMS4Q9H426 269 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 CHMP1AQ9HD42 196 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 STEAP1Q9UHE8 339 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 ZNF107Q9UII5 783 aaPredicted RBP9.77□□□□□ -0.85
CPSF4-208ENST00000452047 AK3Q9UIJ7 227 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 HSF4Q9ULV5 492 aa9.77□□□□□ -0.85
CPSF4-208ENST00000452047 CCL24O00175 119 aa9.76□□□□□ -0.85
CPSF4-208ENST00000452047 LDLRAD4O15165 306 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms