RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PRR18Q8N4B5 295 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 TEX29Q8N6K0 151 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 TMEM133Q9H2Q1 129 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 HEXA-AS1Q9H8Q6 139 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 ZNF69Q9UC07 566 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 NUP50Q9UKX7 468 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 SOX21Q9Y651 276 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-202ENST00000451053 HIVEP2P31629 2446 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 IGKV1D-8A0A087WSZ0 117 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 GSTT2P0CG29 244 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 OR5H8P0DN80 308 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 SRD5A1P18405 259 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 FPR2P25090 351 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 NFYBP25208 207 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 SLC6A1P30531 599 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 UBE2E1P51965 193 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 TRIM16LQ309B1 348 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 BCL6BQ8N143 479 aaPredicted RBP10.62□□□□□ -0.71
VPS33A-202ENST00000451053 OR6F1Q8NGZ6 308 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 GALMQ96C23 342 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 CABLES2Q9BTV7 478 aa10.62□□□□□ -0.71
VPS33A-202ENST00000451053 TINAGL1Q9GZM7 467 aaPredicted RBP10.62□□□□□ -0.71
VPS33A-202ENST00000451053 FN1P02751 2386 aaKnown RBP10.61□□□□□ -0.71
VPS33A-202ENST00000451053 SONP18583 2426 aaKnown RBP10.61□□□□□ -0.71
VPS33A-202ENST00000451053 IGHV2-26A0A0B4J1V2 119 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 IGHV3-43A0A0B4J1X8 118 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 F2RL2O00254 374 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 SDCBPO00560 298 aaPredicted RBP10.61□□□□□ -0.71
VPS33A-202ENST00000451053 IGHV3-7P01780 117 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 SCTP09683 121 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 IGHV3-43DP0DP04 118 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 EPHA1P21709 976 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 ECI1P42126 302 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 LOXL3P58215 753 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
VPS33A-202ENST00000451053 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 OR10A7Q8NGE5 316 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 OR4D10Q8NGI6 311 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 OR51S1Q8NGJ8 323 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 OR13D1Q8NGV5 346 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 OR56B4Q8NH76 319 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 OR10J5Q8NHC4 309 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 CHPT1Q8WUD6 406 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 C22orf15Q8WYQ4 148 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 LEAP2Q969E1 77 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 SLC25A21Q9BQT8 299 aaPredicted RBP10.61□□□□□ -0.71
VPS33A-202ENST00000451053 GINS4Q9BRT9 223 aa10.61□□□□□ -0.71
VPS33A-202ENST00000451053 A0A087X0M5 115 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 TRBV6-7A0A0A0MS04 114 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 A0A1B0GX30 115 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ODF3BA8MYP8 253 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 NPFFO15130 113 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 HSPA12AO43301 675 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ZBTB25P24278 435 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 CD34P28906 385 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 RFX2P48378 723 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 HTD2P86397 168 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 GNMTQ14749 295 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 SCGB2B2Q4G0G5 96 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 IGSF11Q5DX21 431 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ZNF626Q68DY1 528 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 FAAP20Q6NZ36 180 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 PLET1Q6UQ28 207 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 IDO2Q6ZQW0 420 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 NRARPQ7Z6K4 114 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 DUSP18Q8NEJ0 188 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 OR11H6Q8NGC7 330 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 OR52L2PQ8NGH6 319 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 OR10V1Q8NGI7 309 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 IL1F10Q8WWZ1 152 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 SCGB3A2Q96PL1 93 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 SLC6A7Q99884 636 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 CLEC7AQ9BXN2 247 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 MS4A7Q9GZW8 240 aaPredicted RBP10.6□□□□□ -0.71
VPS33A-202ENST00000451053 GFOD1Q9NXC2 390 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ZNRD1Q9P1U0 126 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 JPT1Q9UK76 154 aa10.6□□□□□ -0.71
VPS33A-202ENST00000451053 ANK3Q12955 4377 aaKnown RBP10.6□□□□□ -0.71
VPS33A-202ENST00000451053 IGKV1-6A0A0C4DH72 117 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 A0A0U1RQK1 487 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 A0A1W2PPE3 182 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 BET1O15155 118 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 RGS11O94810 467 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 ARG1P05089 322 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 FAM157CP0CG43 387 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 FCGR2CP31995 323 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 BTCP35070 178 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 SAA4P35542 130 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 GNG10P50151 68 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 HERV-K104P61576 105 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 OXA1LQ15070 435 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 PLA1AQ53H76 456 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 DHRS11Q6UWP2 260 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 LHFPL4Q7Z7J7 247 aa10.59□□□□□ -0.71
VPS33A-202ENST00000451053 OR52M1Q8NGK5 317 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms