RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ERASQ7Z444 233 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 CCL17Q92583 94 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
ITGB4-202ENST00000449880 C5orf52A6NGY3 159 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 HYAL3O43820 417 aaPredicted RBP12.13□□□□□ -0.47
ITGB4-202ENST00000449880 KLK2P20151 261 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 CA6P23280 308 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 GAMTQ14353 236 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 CD3EP07766 207 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 MELTFP08582 738 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
ITGB4-202ENST00000449880 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
ITGB4-202ENST00000449880 UPK3AO75631 287 aa12.13□□□□□ -0.47
ITGB4-202ENST00000449880 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 KBTBD11O94819 623 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 RHBDD2Q6NTF9 364 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 TM4SF19Q96DZ7 209 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 TRAV9-1A0A075B6T8 112 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 PMELP40967 661 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 NTN1O95631 604 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 NGFRP08138 427 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 PDCD1Q15116 288 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 CYR61O00622 381 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 GNG10P50151 68 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 LRRC29Q8WV35 223 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 MRGPRFQ96AM1 343 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 LHX9Q9NQ69 397 aa12.12□□□□□ -0.47
ITGB4-202ENST00000449880 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
ITGB4-202ENST00000449880 HIST1H1BP16401 226 aaKnown RBP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 RBM11P57052 281 aaKnown RBP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 DMRTC1Q5HYR2 192 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 OR10S1Q8NGN2 331 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 APOBEC4Q8WW27 367 aaKnown RBP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 SOSTQ9BQB4 213 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 SIP14410 1827 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 DNPH1O43598 174 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 AGAP20933 346 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 UCP3P55916 312 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 MARS2Q96GW9 593 aaKnown RBP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 GALNT14Q96FL9 552 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 PEF1Q9UBV8 284 aaKnown RBP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 COL8A1P27658 744 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 PSMB2P49721 201 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
ITGB4-202ENST00000449880 GABRA6Q16445 453 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 RLFQ13129 1914 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 H3BMH7 237 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
ITGB4-202ENST00000449880 PIN1P1O15428 100 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 ERGP11308 486 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 PSG2P11465 335 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 MISP3Q96FF7 219 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 A8MWL6 223 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 M0R296 226 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 C1QCP02747 245 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 CD1BP29016 333 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 OR5A2Q8NGI9 324 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 SLC25A33Q9BSK2 321 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 C5orf66Q9H5L9 145 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 FOXJ2Q9P0K8 574 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 F5P12259 2224 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 A0A1W2PR80 420 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 J3QT63 122 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 LYZL6O75951 148 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 DXOO77932 396 aaKnown RBP12.1□□□□□ -0.47
ITGB4-202ENST00000449880 G6PCP35575 357 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 RAC3P60763 192 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 ZNF124Q15973 351 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 C1QL3Q5VWW1 255 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 C10orf113Q5VZT2 155 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 C5orf17Q8NAS9 161 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 OR4C12Q96R67 309 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 CLDN18P56856 261 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
ITGB4-202ENST00000449880 LRRC37A2A6NM11 1700 aa12.1□□□□□ -0.47
ITGB4-202ENST00000449880 OR4A8P0C604 315 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
ITGB4-202ENST00000449880 RUNX1Q01196 453 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 RARRES2Q99969 163 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 ZNF71Q9NQZ8 489 aaPredicted RBP12.09□□□□□ -0.47
ITGB4-202ENST00000449880 C21orf140B9A014 251 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 RFESDQ8TAC1 157 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 CT55Q8WUE5 264 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 RND1Q92730 232 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 TMEM208Q9BTX3 173 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 ZNF665Q9H7R5 613 aa12.09□□□□□ -0.47
ITGB4-202ENST00000449880 TMEM210A6NLX4 147 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms