RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 SULT4A1Q9BR01 284 aa10.74□□□□□ -0.69
TOM1-211ENST00000449508 ZNF107Q9UII5 783 aaPredicted RBP10.74□□□□□ -0.69
TOM1-211ENST00000449508 IGHG4P01861 327 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 IGF1P05019 195 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 CHATP28329 748 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 ACTBP60709 375 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 RPS27AP62979 156 aaKnown RBP10.73□□□□□ -0.69
TOM1-211ENST00000449508 CFHR3Q02985 330 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 CD69Q07108 199 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 SPHARQ15513 63 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 C1orf100Q5SVJ3 147 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 C6orf141Q5SZD1 244 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 RNLSQ5VYX0 342 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 CEACAM19Q7Z692 300 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 LRRTM1Q86UE6 522 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 RNF152Q8N8N0 203 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 OR2AK2Q8NG84 335 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 KCNG3Q8TAE7 436 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 PHYHIPQ92561 330 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 RITA1Q96K30 269 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 KCTD7Q96MP8 289 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 NABP2Q9BQ15 211 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 ZNF251Q9BRH9 671 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 TMEM59Q9BXS4 323 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 SCN3BQ9NY72 215 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 ABRACLQ9P1F3 81 aa10.73□□□□□ -0.69
TOM1-211ENST00000449508 OR5H8P0DN80 308 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 CNTFRP26992 372 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 HTR2CP28335 458 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 OR3A3P47888 321 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 DGCR2P98153 550 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 MED22Q15528 200 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 HSD17B12Q53GQ0 312 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 LY6G6FQ5SQ64 297 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 C11orf87Q6NUJ2 197 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 OR5M8Q8NGP6 311 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 SETD6Q8TBK2 473 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 IL1F10Q8WWZ1 152 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 CHCHD6Q9BRQ6 235 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 NICN1Q9BSH3 213 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 MRPL20Q9BYC9 149 aaKnown RBP10.72□□□□□ -0.69
TOM1-211ENST00000449508 CHMP1AQ9HD42 196 aaPredicted RBP10.72□□□□□ -0.69
TOM1-211ENST00000449508 STEAP1Q9UHE8 339 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 WSB1Q9Y6I7 421 aa10.72□□□□□ -0.69
TOM1-211ENST00000449508 RAMP3O60896 148 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 PSMB8P28062 276 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 BLVRBP30043 206 aaPredicted RBP10.71□□□□□ -0.69
TOM1-211ENST00000449508 HMGN3Q15651 99 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 C9orf66Q5T8R8 295 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 LIN54Q6MZP7 749 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 TMEM65Q6PI78 240 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 ZNF833PQ6ZTB9 187 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 ANKRD60Q9BZ19 345 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 OR51J1Q9H342 316 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 KCNK15Q9H427 330 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 PLEKHJ1Q9NW61 149 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 ZNF580Q9UK33 172 aa10.71□□□□□ -0.69
TOM1-211ENST00000449508 LSM2Q9Y333 95 aaKnown RBP10.71□□□□□ -0.69
TOM1-211ENST00000449508 SAA2-SAA4A0A096LPE2 208 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 TMEM14DPA8MWL7 114 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 G3V318 75 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 SLC22A1O15245 554 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 NBR2O15453 112 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 SAA2P0DJI9 122 aaPredicted RBP10.7□□□□□ -0.7
TOM1-211ENST00000449508 PPIFP30405 207 aaKnown RBP10.7□□□□□ -0.7
TOM1-211ENST00000449508 LUMP51884 338 aaPredicted RBP10.7□□□□□ -0.7
TOM1-211ENST00000449508 UNC119Q13432 240 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 DCTN2Q13561 401 aaKnown RBP10.7□□□□□ -0.7
TOM1-211ENST00000449508 C5orf64Q2M2E5 130 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 LIPKQ5VXJ0 399 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 SVOPQ8N4V2 548 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 TMEM203Q969S6 136 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 TM2D1Q9BX74 207 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 KLK15Q9H2R5 256 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 PARP11Q9NR21 331 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 PIPOXQ9P0Z9 390 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 KIAA1456Q9P272 454 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 DNAH9Q9NYC9 4486 aa10.7□□□□□ -0.7
TOM1-211ENST00000449508 NBEAL2Q6ZNJ1 2754 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 TENM3Q9P273 2699 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 SEC14L6B5MCN3 397 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 RAB29O14966 203 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 BPNT1O95861 308 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 NAPSAO96009 420 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 UCHL1P09936 223 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 CD37P11049 281 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 QRFPP83859 136 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 ZNF880Q6PDB4 577 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 NPBQ8NG41 125 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 OR6M1Q8NGM8 313 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 UFD1Q92890 307 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 UBE2E2Q96LR5 201 aa10.69□□□□□ -0.7
TOM1-211ENST00000449508 URM1Q9BTM9 101 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms