RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FLVCR2Q9UPI3 526 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 KPTNQ9Y664 436 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 MED13LQ71F56 2210 aa15.8■□□□□ 0.12
RPS28-202ENST00000449223 IGHV3-43A0A0B4J1X8 118 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 ARPC1BO15143 372 aaKnown RBP15.79■□□□□ 0.12
RPS28-202ENST00000449223 CTSDP07339 412 aaPredicted RBP15.79■□□□□ 0.12
RPS28-202ENST00000449223 IGHV3-43DP0DP04 118 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 LUMP51884 338 aaPredicted RBP15.79■□□□□ 0.12
RPS28-202ENST00000449223 LCN2P80188 198 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 FAM53AQ6NSI3 398 aaPredicted RBP15.79■□□□□ 0.12
RPS28-202ENST00000449223 ZNF596Q8TC21 504 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 ZFAND1Q8TCF1 268 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 SESN1Q9Y6P5 492 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 CREBBPQ92793 2442 aa15.79■□□□□ 0.12
RPS28-202ENST00000449223 TRAV6A0A075B6T7 132 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 FXYD4P59646 89 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 UBE2MP61081 183 aaKnown RBP15.78■□□□□ 0.12
RPS28-202ENST00000449223 FAHD2BQ6P2I3 314 aaPredicted RBP15.78■□□□□ 0.12
RPS28-202ENST00000449223 Q8N7P7 452 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 TOMM40LQ969M1 308 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 FAHD2AQ96GK7 314 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 RTBDNQ9BSG5 229 aaPredicted RBP15.78■□□□□ 0.12
RPS28-202ENST00000449223 CCDC168Q8NDH2 2452 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 PRAF2O60831 178 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 SLC22A5O76082 557 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 IGLV2-14P01704 120 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 GNRHRP30968 328 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 RAB7AP51149 207 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 LTC4SQ16873 150 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.78■□□□□ 0.124e-10■■■■□ 24.6
RPS28-202ENST00000449223 SLC25A48Q6ZT89 311 aaKnown RBP15.78■□□□□ 0.12
RPS28-202ENST00000449223 SLC25A42Q86VD7 318 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 OR2AK2Q8NG84 335 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 REG4Q9BYZ8 158 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 GHITMQ9H3K2 345 aa15.78■□□□□ 0.12
RPS28-202ENST00000449223 METTL8Q9H825 291 aaKnown RBP15.78■□□□□ 0.12
RPS28-202ENST00000449223 A0A0B4J293 547 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 B4DSR2 109 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 ZNF134P52741 427 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 ERVFRD-1P60508 538 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 DHODHQ02127 395 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 BAMBIQ13145 260 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 LINC00311Q8N616 119 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 BVESQ8NE79 360 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 AKR1E2Q96JD6 320 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 Q96MF0 132 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 SLC5A7Q9GZV3 580 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 TMEM133Q9H2Q1 129 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 MMP26Q9NRE1 261 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 ONECUT1Q9UBC0 465 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 ZNF221Q9UK13 617 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 GAB2Q9UQC2 676 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 CR1P17927 2039 aa15.77■□□□□ 0.11
RPS28-202ENST00000449223 C7orf66A4D0T2 115 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 DHFRP00374 187 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 RLN1P04808 185 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 IL5P05113 134 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 OR8U9P0C7N5 309 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 PGAM2P15259 253 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 PRTN3P24158 256 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 NFYBP25208 207 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 TAS2R31P59538 309 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 RND3P61587 244 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 TMEM128Q5BJH2 165 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 CT45A1Q5HYN5 189 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 UTF1Q5T230 341 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 BTNL3Q6UXE8 466 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 ZNF818PQ6ZRF7 136 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 ZNF645Q8N7E2 425 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 ZBTB34Q8NCN2 500 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 OR8U1Q8NH10 309 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 CT45A3Q8NHU0 189 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 SECTM1Q8WVN6 248 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 TNFRSF14Q92956 283 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 TMEM230Q96A57 120 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 ABHD14AQ9BUJ0 271 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 SIRPDQ9H106 197 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 IFI27L2Q9H2X8 130 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 PSG11Q9UQ72 335 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 C14orf166Q9Y224 244 aaKnown RBP15.76■□□□□ 0.11
RPS28-202ENST00000449223 INSIG2Q9Y5U4 225 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 ITPR3Q14573 2671 aa15.76■□□□□ 0.11
RPS28-202ENST00000449223 WNK2Q9Y3S1 2297 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 GPR31O00270 319 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 MSMBP08118 114 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 MMP9P14780 707 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 ANXA7P20073 488 aaKnown RBP15.75■□□□□ 0.11
RPS28-202ENST00000449223 ARF6P62330 175 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 TATDN3Q17R31 274 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 SLC2A9Q9NRM0 540 aa15.75■□□□□ 0.11
RPS28-202ENST00000449223 DVL1P1P54792 670 aaPredicted RBP15.74■□□□□ 0.11
RPS28-202ENST00000449223 GLDNQ6ZMI3 551 aaPredicted RBP15.74■□□□□ 0.11
RPS28-202ENST00000449223 TMED4Q7Z7H5 227 aa15.74■□□□□ 0.11
RPS28-202ENST00000449223 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.74■□□□□ 0.11
RPS28-202ENST00000449223 OR9G1Q8NH87 305 aa15.74■□□□□ 0.11
RPS28-202ENST00000449223 SUCNR1Q9BXA5 334 aa15.74■□□□□ 0.11
RPS28-202ENST00000449223 OR2D2Q9H210 308 aa15.74■□□□□ 0.11
RPS28-202ENST00000449223 CCL28Q9NRJ3 127 aa15.74■□□□□ 0.11
RPS28-202ENST00000449223 IGHV2-26A0A0B4J1V2 119 aa15.73■□□□□ 0.11
RPS28-202ENST00000449223 RNF223E7ERA6 249 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms