RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MMP28Q9H239 520 aa16■□□□□ 0.15
SGCE-207ENST00000447873 TMEM133Q9H2Q1 129 aa16■□□□□ 0.15
SGCE-207ENST00000447873 NUDT15Q9NV35 164 aa16■□□□□ 0.15
SGCE-207ENST00000447873 INSIG2Q9Y5U4 225 aa16■□□□□ 0.15
SGCE-207ENST00000447873 NUBP2Q9Y5Y2 271 aa16■□□□□ 0.15
SGCE-207ENST00000447873 CREBBPQ92793 2442 aa16■□□□□ 0.15
SGCE-207ENST00000447873 TRAV6A0A075B6T7 132 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 OR8U9P0C7N5 309 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 PGAM2P15259 253 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 GNG10P50151 68 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 TMEM249Q2WGJ8 235 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 LY6G6FQ5SQ64 297 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 CENPSQ8N2Z9 138 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 MINDY2Q8NBR6 621 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 OR8U1Q8NH10 309 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 SECTM1Q8WVN6 248 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 SCGB3A2Q96PL1 93 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 FXYD6Q9H0Q3 95 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 C20orf85Q9H1P6 137 aa15.99■□□□□ 0.15
SGCE-207ENST00000447873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.99■□□□□ 0.155e-9■■■■■ 37
SGCE-207ENST00000447873 A0A087X0M5 115 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 TRAV20A0A0B4J274 112 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 IGKV1D-13A0A0B4J2D9 117 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 A0A1B0GX30 115 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 RLN1P04808 185 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 IGKV1-13P0DP09 117 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 BAMBIQ13145 260 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 SURF2Q15527 256 aaPredicted RBP15.98■□□□□ 0.15
SGCE-207ENST00000447873 LPCAT3Q6P1A2 487 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 ABHD14AQ9BUJ0 271 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 SLC5A7Q9GZV3 580 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 SIRT7Q9NRC8 400 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 PSG11Q9UQ72 335 aa15.98■□□□□ 0.15
SGCE-207ENST00000447873 A0A1W2PPE3 182 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 ARPC1BO15143 372 aaKnown RBP15.97■□□□□ 0.15
SGCE-207ENST00000447873 TOX4O94842 621 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 PRTN3P24158 256 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 ZNF134P52741 427 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 UCP3P55916 312 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 DLX1P56177 255 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 Q3ZCU0 254 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 DCAF12L2Q5VW00 463 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 VMO1Q7Z5L0 202 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 ABHD12Q8N2K0 398 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 ZDHHC22Q8N966 263 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 ZFAND1Q8TCF1 268 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 TMEM186Q96B77 213 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 CREB3L1Q96BA8 519 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 UPRTQ96BW1 309 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 PCGF1Q9BSM1 259 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 SIRPDQ9H106 197 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 HIF1ANQ9NWT6 349 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 FLVCR2Q9UPI3 526 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 VSIG4Q9Y279 399 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 MYO9AB2RTY4 2548 aa15.97■□□□□ 0.15
SGCE-207ENST00000447873 ITGB1BP1O14713 200 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 ST8SIA5O15466 376 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 IGHV4-31P0DP07 118 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 GZMKP49863 264 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 RAB7AP51149 207 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 PRB3Q04118 309 aaPredicted RBP15.96■□□□□ 0.15
SGCE-207ENST00000447873 PAX8Q06710 450 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 CT45A1Q5HYN5 189 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 TMED4Q7Z7H5 227 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 LDLRAD3Q86YD5 345 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 SLC38A6Q8IZM9 456 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 ZNF439Q8NDP4 499 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 OR13D1Q8NGV5 346 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 OR9G1Q8NH87 305 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 CT45A3Q8NHU0 189 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 FAM216AQ8WUB2 273 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 MSI2Q96DH6 328 aaKnown RBP15.96■□□□□ 0.15
SGCE-207ENST00000447873 RNF150Q9ULK6 438 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 KCNS2Q9ULS6 477 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 GPR132Q9UNW8 380 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 AKAP9Q99996 3911 aa15.96■□□□□ 0.15
SGCE-207ENST00000447873 FLNAP21333 2647 aaKnown RBP15.96■□□□□ 0.14
SGCE-207ENST00000447873 TOR1AO14656 332 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 SLC31A2O15432 143 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 TGFAP01135 160 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 H2AFB2P0C5Z0 115 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 CD34P28906 385 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 AGMATQ9BSE5 352 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 CLEC7AQ9BXN2 247 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 OR2D2Q9H210 308 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 HEXA-AS1Q9H8Q6 139 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 UNKLQ9H9P5 680 aaKnown RBP15.96■□□□□ 0.14
SGCE-207ENST00000447873 CCL28Q9NRJ3 127 aa15.96■□□□□ 0.14
SGCE-207ENST00000447873 C14orf166Q9Y224 244 aaKnown RBP15.96■□□□□ 0.14
SGCE-207ENST00000447873 IGHV2-26A0A0B4J1V2 119 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 J3QR06 171 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 HSD17B6O14756 317 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 MMP9P14780 707 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 PI3P19957 117 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 GATA3P23771 443 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 COX7A1P24310 79 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 GNRHRP30968 328 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 RAB25P57735 213 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 ABCA11PQ4W5N1 156 aa15.95■□□□□ 0.14
SGCE-207ENST00000447873 SLC25A48Q6ZT89 311 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms