RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 OR7A5Q15622 319 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 RAB11BQ15907 218 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 HIKESHIQ53FT3 197 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 TMEM255AQ5JRV8 349 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 LY6G6FQ5SQ64 297 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 C1orf140Q5VVS0 124 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 LAMTOR1Q6IAA8 161 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GUSBP11Q6P575 273 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 DNM1P34Q6PK57 102 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 NDUFAF7Q7L592 441 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 SKA3Q8IX90 412 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 C9orf62Q8N4C0 152 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 EID2Q8N6I1 236 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 POM121L12Q8N7R1 296 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 PLPP5Q8NEB5 264 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 OR51A4Q8NGJ6 313 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 OTOSQ8NHW6 89 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 MARCH1Q8TCQ1 289 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GPR119Q8TDV5 335 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GLYATL2Q8WU03 294 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 C15orf40Q8WUR7 153 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 ASB17Q8WXJ9 295 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 C8orf44Q96CB5 159 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 HIST1H4GQ99525 98 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 SEC22CQ9BRL7 303 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 SELENOIQ9C0D9 397 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 ATG5Q9H1Y0 275 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 OR51M1Q9H341 326 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 TXNIPQ9H3M7 391 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 RANBP3Q9H6Z4 567 aaPredicted RBP3.1□□□□□ -1.91
VPS29-202ENST00000447578 TAS2R4Q9NYW5 299 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 KCNIP1Q9NZI2 227 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 MED11Q9P086 117 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 FLVCR2Q9UPI3 526 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 FLVCR1Q9Y5Y0 555 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 LRP4O75096 1905 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 DOCK8Q8NF50 2099 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 IGHV1OR15-1A0A075B7D0 117 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 MEIKINA0A087WXM9 373 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 IGLV1-36A0A0B4J1U3 117 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 A0A1B0GUH1 482 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 A0A1B0GVI7 797 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ANKRD20A5PA0PJZ0 165 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 MEIS3P1A6NDR6 274 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 A6NIZ1 184 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 OR2T1O43869 369 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 FADS1O60427 444 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ZNF354AO60765 605 aaPredicted RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 NPIPB7O75200 414 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 RBBP9O75884 186 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 LDOC1O95751 146 aaPredicted RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 TSPAN13O95857 204 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 IGHV2-5P01817 119 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ALDOBP05062 364 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 DCNP07585 359 aaKnown RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 SULT1A3P0DMM9 295 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 SULT1A4P0DMN0 295 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 PSMB1P20618 241 aaKnown RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 MSR1P21757 451 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 GATA2P23769 480 aaPredicted RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 CRABP1P29762 137 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 FAUP35544 74 aaKnown RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 CXCL12P48061 93 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 DNASE1L1P49184 302 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ARRB1P49407 418 aaPredicted RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 EMP2P54851 167 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 GNG2P59768 71 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 RAP1BP61224 184 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 RAP1AP62834 184 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 DCDP81605 110 aaKnown RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 MRPS10P82664 201 aaKnown RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 GLO1Q04760 184 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 FMODQ06828 376 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 FOXF1Q12946 379 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 LINC00303Q3SY05 128 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 NKAIN1Q4KMZ8 207 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 SOHLH1Q5JUK2 328 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 GLT8D1Q68CQ7 371 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 C11orf71Q6IPW1 123 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 SLC25A25Q6KCM7 469 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 C5orf46Q6UWT4 87 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ZNF767PQ75MW2 155 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 OR11G2Q8NGC1 345 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 OR51D1Q8NGF3 324 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 OR5M1Q8NGP8 315 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 MFSD8Q8NHS3 518 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 NUBPLQ8TB37 319 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 GPX8Q8TED1 209 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 HGDQ93099 445 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 TMEM106AQ96A25 262 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 DDIT4LQ96D03 193 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 EMC6Q9BV81 110 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ZNF436Q9C0F3 470 aaPredicted RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 Q9H3A6 140 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 RGCCQ9H4X1 137 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 NOX3Q9HBY0 568 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 DIABLOQ9NR28 239 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 ZNF275Q9NSD4 429 aaPredicted RBP3.09□□□□□ -1.91
VPS29-202ENST00000447578 EMC3Q9P0I2 261 aa3.09□□□□□ -1.91
VPS29-202ENST00000447578 MYEF2Q9P2K5 600 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms