RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 OR4X1Q8NH49 305 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 MRPL30Q8TCC3 161 aaKnown RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 HELTA6NFD8 242 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 CLDN34H7C241 214 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ISLRO14498 428 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 MPZL1O95297 269 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 GYPAP02724 150 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 BLNKQ8WV28 456 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ANK1P16157 1881 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF735P0CB33 412 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 RPL8P62917 257 aaKnown RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF154Q13106 437 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 OR52B4Q8NGK2 314 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 MARVELD1Q9BSK0 173 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 DCTN5Q9BTE1 182 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 NXF2Q9GZY0 626 aaKnown RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 URGCP-MRPS24S4R325 110 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 LOC101059948A0A1B0GTJ6 334 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 UPK3AO75631 287 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 SNRPD3P62318 126 aaKnown RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 CCL8P80075 99 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 CTF1Q16619 201 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 SP6Q3SY56 376 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 C10orf128Q5T292 105 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 OR4P4Q8NGL7 312 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 FAM168AQ92567 244 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 LURAP1Q96LR2 239 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 P2RX4Q99571 388 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 NAT8Q9UHE5 227 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 TRAPPC1Q9Y5R8 145 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZDBF2Q9HCK1 2354 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF646O15015 1829 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 KLF9Q13886 244 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF705AQ6ZN79 300 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF385AQ96PM9 386 aaKnown RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 KCNK17Q96T54 332 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 VAX2Q9UIW0 290 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ARL2-SNX15V9GYD0 113 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 RGS13O14921 159 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 PPP1R32Q7Z5V6 425 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.41□□□□□ -1.22
PTPN3-204ENST00000446349 FDCSPQ8NFU4 85 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 TMEM56-RWDD3S4R434 201 aa7.41□□□□□ -1.22
PTPN3-204ENST00000446349 A0A1W2PQM1 296 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 ATP5G2Q06055 141 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 AESQ08117 197 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 SPSB2Q99619 263 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 GREM1O60565 184 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 CMC4P56277 68 aaPredicted RBP7.4□□□□□ -1.22
PTPN3-204ENST00000446349 MEF2CQ06413 473 aaPredicted RBP7.4□□□□□ -1.22
PTPN3-204ENST00000446349 LRRTM1Q86UE6 522 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 GAPTQ8N292 157 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 ITLN1Q8WWA0 313 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 IL22RA2Q969J5 263 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 RNF167Q9H6Y7 350 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 ZMIZ1Q9ULJ6 1067 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 WDR81Q562E7 1941 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 EPOPA6NHQ4 379 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 IL18BPO95998 194 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 COL8A1P27658 744 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 TIAL1Q01085 375 aaKnown RBP eCLIP7.4□□□□□ -1.22
PTPN3-204ENST00000446349 CEBPEQ15744 281 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 SPNS2Q8IVW8 549 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 OR8D4Q8NGM9 314 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 SLIRPQ9GZT3 109 aaKnown RBP7.4□□□□□ -1.22
PTPN3-204ENST00000446349 TNFRSF19Q9NS68 423 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 HSPB8Q9UJY1 196 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 ARID1AO14497 2285 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 ODAMA1E959 279 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 UBALD1Q8TB05 177 aa7.4□□□□□ -1.22
PTPN3-204ENST00000446349 DYNLT3P51808 116 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 TMEM54Q969K7 222 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 CTHRC1Q96CG8 243 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 ALX4Q9H161 411 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-204ENST00000446349 MRPS18BQ9Y676 258 aaKnown RBP7.4□□□□□ -1.23
PTPN3-204ENST00000446349 SIPA1L1O43166 1804 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 A0A1W2PPQ1 181 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 C17orf51A8MQB3 221 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 HRKO00198 91 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 TOX4O94842 621 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 RPL7P18124 248 aaKnown RBP7.4□□□□□ -1.23
PTPN3-204ENST00000446349 MEOX2P50222 304 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 Q1RN00 199 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 CENPVQ7Z7K6 275 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-204ENST00000446349 FAM222BQ8WU58 562 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 G6PC2Q9NQR9 355 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 CDC42EP3Q9UKI2 254 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 FNDC1Q4ZHG4 1894 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-204ENST00000446349 CTXND1A0A1B0GTU2 59 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 ZNF680Q8NEM1 530 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 ST6GALNAC2Q9UJ37 374 aa7.4□□□□□ -1.23
PTPN3-204ENST00000446349 E9PLN8 166 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 HPXP02790 462 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 SLC35E4Q6ICL7 350 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 VKORC1Q9BQB6 163 aa7.39□□□□□ -1.23
PTPN3-204ENST00000446349 METTL1Q9UBP6 276 aaKnown RBP7.39□□□□□ -1.23
PTPN3-204ENST00000446349 MDC1Q14676 2089 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms