RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZNF665Q9H7R5 613 aa13.09□□□□□ -0.31
SNX13-204ENST00000444712 SDHAF2Q9NX18 166 aa13.09□□□□□ -0.31
SNX13-204ENST00000444712 CADP27708 2225 aa13.09□□□□□ -0.31
SNX13-204ENST00000444712 TANC2Q9HCD6 1990 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 BORCS7-ASMTA0A0B4J1R7 106 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 CCL21O00585 134 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 TFF1P04155 84 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 SSTR5P35346 364 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 TMEM33P57088 247 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 VAMP2P63027 116 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 TEX36Q5VZQ5 186 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 FAM219AQ8IW50 185 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 SLC25A31Q9H0C2 315 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 FBXL17Q9UF56 701 aa13.08□□□□□ -0.31
SNX13-204ENST00000444712 RAI1Q7Z5J4 1906 aaPredicted RBP13.08□□□□□ -0.32
SNX13-204ENST00000444712 I3L521 148 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 WRBO00258 174 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 ID3Q02535 119 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 ADAM5Q6NVV9 412 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 ZNF66Q6ZN08 573 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 HSD17B13Q7Z5P4 300 aaPredicted RBP13.08□□□□□ -0.32
SNX13-204ENST00000444712 TPRX1Q8N7U7 411 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 DMBX1Q8NFW5 382 aa13.08□□□□□ -0.32
SNX13-204ENST00000444712 MFSD2BA6NFX1 497 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 CD3EP07766 207 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
SNX13-204ENST00000444712 AKR1C2P52895 323 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 TLE1Q04724 770 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 TMEM30BQ3MIR4 351 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 TOR2AQ5JU69 321 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 EIF4E3Q8N5X7 224 aaKnown RBP13.07□□□□□ -0.32
SNX13-204ENST00000444712 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
SNX13-204ENST00000444712 LAMP3Q9UQV4 416 aa13.07□□□□□ -0.32
SNX13-204ENST00000444712 F2RL2O00254 374 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 FGF16O43320 207 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 YPEL1O60688 119 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 CYB5R3P00387 301 aaPredicted RBP13.06□□□□□ -0.32
SNX13-204ENST00000444712 PPP1CCP36873 323 aaKnown RBP13.06□□□□□ -0.32
SNX13-204ENST00000444712 ID4P47928 161 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 EDDM3BP56851 147 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 OR2C3Q8N628 320 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 UBAC2Q8NBM4 344 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 ZNRF1Q8ND25 227 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
SNX13-204ENST00000444712 YPEL2Q96QA6 119 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 HSD17B10Q99714 261 aaKnown RBP13.06□□□□□ -0.32
SNX13-204ENST00000444712 C11orf1Q9H5F2 150 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 SPENQ96T58 3664 aaKnown RBP13.06□□□□□ -0.32
SNX13-204ENST00000444712 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 PITX3O75364 302 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 RPL7L1Q6DKI1 246 aaKnown RBP13.06□□□□□ -0.32
SNX13-204ENST00000444712 UNQ6494/PRO21346Q6UXR6 183 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 ZNF788Q6ZQV5 615 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 PLPPR2Q96GM1 343 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 REG4Q9BYZ8 158 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 MS4A5Q9H3V2 200 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 GNG12Q9UBI6 72 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 DSCAML1Q8TD84 2053 aa13.06□□□□□ -0.32
SNX13-204ENST00000444712 NUDT19A8MXV4 375 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 SHISA9B4DS77 424 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 C1QTNF9P0C862 333 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 POLR2GP62487 172 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNX13-204ENST00000444712 BAXQ07812 192 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 EIF4EBP1Q13541 118 aaPredicted RBP13.05□□□□□ -0.32
SNX13-204ENST00000444712 TMED6Q8WW62 240 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
SNX13-204ENST00000444712 DSCAMO60469 2012 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 TRGV10A0A0A0MS01 117 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 SSSCA1O60232 199 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 APOBEC3AP31941 199 aaPredicted RBP13.05□□□□□ -0.32
SNX13-204ENST00000444712 CCL8P80075 99 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 EFNB3Q15768 340 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 ZNF585BQ52M93 769 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 CD300LFQ8TDQ1 290 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
SNX13-204ENST00000444712 GAFA1Q96PS6 74 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 RAB40CQ96S21 281 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 PRORYQ9H606 182 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 DYNLRB1Q9NP97 96 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 COA4Q9NYJ1 87 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 CALYQ9NYX4 217 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 RNF150Q9ULK6 438 aa13.05□□□□□ -0.32
SNX13-204ENST00000444712 FAM90A27PA6NNH2 459 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 B9A039 149 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 LGALS8O00214 317 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 IGKV1-39P01597 117 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 IGKV1D-39P04432 117 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 EPHA1P21709 976 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 RAB7AP51149 207 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNX13-204ENST00000444712 MORN2Q502X0 79 aa13.04□□□□□ -0.32
SNX13-204ENST00000444712 CXorf66Q5JRM2 361 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms