RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 ZDHHC22Q8N966 263 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 DTX3Q8N9I9 347 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 GCDHQ92947 438 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 C6orf62Q9GZU0 229 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 AUNIPQ9H7T9 357 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 VPREB3Q9UKI3 123 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 RBM7Q9Y580 266 aaKnown RBP11.42□□□□□ -0.58
SSBP3-208ENST00000444533 NF1P21359 2839 aa11.42□□□□□ -0.58
SSBP3-208ENST00000444533 A0A1W2PPE3 182 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 EIF4EP06730 217 aaKnown RBP11.41□□□□□ -0.58
SSBP3-208ENST00000444533 ELK1P19419 428 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 KRTAP21-3Q3LHN1 58 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 Q6ZS49 121 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
SSBP3-208ENST00000444533 OR8H3Q8N146 312 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 LYG1Q8N1E2 194 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 C17orf50Q8WW18 174 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 AKR1E2Q96JD6 320 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 ESM1Q9NQ30 184 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 PIPOXQ9P0Z9 390 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 MXRA5Q9NR99 2828 aa11.41□□□□□ -0.58
SSBP3-208ENST00000444533 ANK3Q12955 4377 aaKnown RBP11.4□□□□□ -0.58
SSBP3-208ENST00000444533 HSD17B6O14756 317 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 GSTT2P0CG29 244 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 GSTT2BP0CG30 244 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 FAM106CPP0CH98 169 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 S100A5P33763 92 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 DYNLT3P51808 116 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 GNMTQ14749 295 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 DHRS7BQ6IAN0 325 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-208ENST00000444533 TGIF2LXQ8IUE1 241 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 BEST4Q8NFU0 473 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 MCFD2Q8NI22 146 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 MAFIPQ8WZ33 124 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 DGCR14Q96DF8 476 aaKnown RBP11.4□□□□□ -0.58
SSBP3-208ENST00000444533 S1PR3Q99500 378 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 CHIAQ9BZP6 476 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 RABL2AQ9UBK7 228 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-208ENST00000444533 EXTL2Q9UBQ6 330 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 ZNF221Q9UK13 617 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 ELF5Q9UKW6 265 aaPredicted RBP11.4□□□□□ -0.58
SSBP3-208ENST00000444533 RABL2BQ9UNT1 228 aa11.4□□□□□ -0.58
SSBP3-208ENST00000444533 ITGB1BP1O14713 200 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 RAB29O14966 203 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 TPPPO94811 219 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 LY6EQ16553 131 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 CT45A1Q5HYN5 189 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 CNIH2Q6PI25 160 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 MOB3BQ86TA1 216 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 SNX29P2Q8IUI4 249 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 CT45A3Q8NHU0 189 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 CYYR1Q96J86 154 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 DCUN1D5Q9BTE7 237 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 CABLES2Q9BTV7 478 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 SCPEP1Q9HB40 452 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 NECAP2Q9NVZ3 263 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 ANXA10Q9UJ72 324 aa11.39□□□□□ -0.59
SSBP3-208ENST00000444533 LY6LH3BQJ8 138 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 SULT1C2O00338 296 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 GPR137BO60478 399 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 OR3A3P47888 321 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 SRSF2Q01130 221 aaKnown RBP11.38□□□□□ -0.59
SSBP3-208ENST00000444533 ZNF816Q0VGE8 651 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-208ENST00000444533 HES1Q14469 280 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 IGSF11Q5DX21 431 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 HOGA1Q86XE5 327 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 ZNF439Q8NDP4 499 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 DIRAS2Q96HU8 199 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 RDH8Q9NYR8 311 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 OR1A1Q9P1Q5 309 aa11.38□□□□□ -0.59
SSBP3-208ENST00000444533 TRBV6-7A0A0A0MS04 114 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 SLC31A2O15432 143 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 LANCL1O43813 399 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 SSX5O60225 188 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 PAX6P26367 422 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 GPR12P47775 334 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 REG1BP48304 166 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 ZNF134P52741 427 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 ZNF137PP52743 207 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 TAS2R46P59540 309 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 FAM71F2Q6NXP2 309 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 Q6ZPA2 131 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 C16orf82Q7Z2V1 217 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 DYNAPQ8N1N2 210 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 RTN4IP1Q8WWV3 396 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-208ENST00000444533 C19orf24Q9BVV8 132 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 NPFFR1Q9GZQ6 430 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 RBM38Q9H0Z9 239 aaKnown RBP11.37□□□□□ -0.59
SSBP3-208ENST00000444533 MMP27Q9H306 513 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 TCF19Q9Y242 345 aa11.37□□□□□ -0.59
SSBP3-208ENST00000444533 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 MEIS3P1A6NDR6 274 aa11.36□□□□□ -0.59
SSBP3-208ENST00000444533 CTDSP2O14595 271 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms