RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 OR4F4Q96R69 305 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 HDHD3Q9BSH5 251 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-203ENST00000444440 TM2D1Q9BX74 207 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 PLEKHJ1Q9NW61 149 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 STUB1Q9UNE7 303 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 COL7A1Q02388 2944 aa8.58□□□□□ -1.04
SF3A1-203ENST00000444440 SHISA3A0PJX4 238 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 PSMB11A5LHX3 300 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 M0QZK8 103 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 SOCS1O15524 211 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 FGF16O43320 207 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 IGHG2P01859 326 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 RAB3BP20337 219 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 FGF9P31371 208 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-203ENST00000444440 HMGN3Q15651 99 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 C2orf76Q3KRA6 126 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 Q3ZCU0 254 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 ZNF554Q86TJ5 538 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 OR51D1Q8NGF3 324 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 RITA1Q96K30 269 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 HSPB9Q9BQS6 159 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 PARP12Q9H0J9 701 aaKnown RBP8.57□□□□□ -1.04
SF3A1-203ENST00000444440 LPAR5Q9H1C0 372 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 RIMS4Q9H426 269 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-203ENST00000444440 VCX3AQ9NNX9 186 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 OR2S2Q9NQN1 319 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 GNG12Q9UBI6 72 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 STEAP1Q9UHE8 339 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 RAB22AQ9UL26 194 aa8.57□□□□□ -1.04
SF3A1-203ENST00000444440 TSSC4Q9Y5U2 329 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-203ENST00000444440 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-203ENST00000444440 NAPSAO96009 420 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 CNTFRP26992 372 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 CD1BP29016 333 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 OR3A3P47888 321 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 TMEM50BP56557 158 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 CLDN12P56749 244 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 LSAMPQ13449 338 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 KHDC1LQ5JSQ8 128 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 HES5Q5TA89 166 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 FOXB2Q5VYV0 432 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 C22orf42Q6IC83 251 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 ZNF880Q6PDB4 577 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 SLC35E3Q7Z769 313 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 TPRA1Q86W33 373 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 TGIF2LXQ8IUE1 241 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 STPG2Q8N412 459 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 FAM89BQ8N5H3 189 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 WFDC9Q8NEX5 89 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 OR4X2Q8NGF9 303 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 OR56B1Q8NGI3 324 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-203ENST00000444440 AURKAIP1Q9NWT8 199 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-203ENST00000444440 ABRACLQ9P1F3 81 aa8.56□□□□□ -1.04
SF3A1-203ENST00000444440 HUWE1Q7Z6Z7 4374 aaKnown RBP8.56□□□□□ -1.04
SF3A1-203ENST00000444440 A0A087WXM4 84 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 METTL21EPA6NDL7 271 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 IFITM5A6NNB3 132 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 NCBP2LA6PVI3 153 aaKnown RBP8.55□□□□□ -1.04
SF3A1-203ENST00000444440 SERPINE3A8MV23 424 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 RGS11O94810 467 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 TNFAIP8O95379 198 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 PF4V1P10720 104 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 SNRPBP14678 240 aaKnown RBP8.55□□□□□ -1.04
SF3A1-203ENST00000444440 IL3RAP26951 378 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 GPR12P47775 334 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 RPL23AP62750 156 aaKnown RBP8.55□□□□□ -1.04
SF3A1-203ENST00000444440 NEDD8Q15843 81 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 STEAP3Q658P3 488 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 FAM71E2Q8N5Q1 922 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 OR2T10Q8NGZ9 312 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 GALMQ96C23 342 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 S1PR3Q99500 378 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 ABHD14AQ9BUJ0 271 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 MRPL20Q9BYC9 149 aaKnown RBP8.55□□□□□ -1.04
SF3A1-203ENST00000444440 ABCG5Q9H222 651 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 IFI27L2Q9H2X8 130 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 TXNL4BQ9NX01 149 aaKnown RBP8.55□□□□□ -1.04
SF3A1-203ENST00000444440 AK3Q9UIJ7 227 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 JPT1Q9UK76 154 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 HSF4Q9ULV5 492 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 MGAT4AQ9UM21 535 aa8.55□□□□□ -1.04
SF3A1-203ENST00000444440 SAA2-SAA4A0A096LPE2 208 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 LANCL1O43813 399 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 RRP9O43818 475 aaKnown RBP8.54□□□□□ -1.04
SF3A1-203ENST00000444440 MOSP00540 346 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 PF4P02776 101 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 SAA2P0DJI9 122 aaPredicted RBP8.54□□□□□ -1.04
SF3A1-203ENST00000444440 CD33P20138 364 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 RAB6AP20340 208 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 GADD45AP24522 165 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 VEGFCP49767 419 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 OR10A3P58181 314 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 KRTAP10-11P60412 298 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 MRPS15P82914 257 aaKnown RBP8.54□□□□□ -1.04
SF3A1-203ENST00000444440 HTD2P86397 168 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
SF3A1-203ENST00000444440 MOB1BQ7L9L4 216 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms