RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PSMB11A5LHX3 300 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 MOSP00540 346 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 PF4V1P10720 104 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 CD1BP29016 333 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 PLA2G7Q13093 441 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 C2orf76Q3KRA6 126 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 UBE2UQ5VVX9 321 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 STEAP3Q658P3 488 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 CD200R1LQ6Q8B3 271 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 OR56B1Q8NGI3 324 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 FCGR1BQ92637 280 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 NOL4LQ96MY1 436 aaPredicted RBP16.7■□□□□ 0.26
CDKN3-204ENST00000442975 LRRC42Q9Y546 428 aa16.7■□□□□ 0.26
CDKN3-204ENST00000442975 TRAV1-2A0A0B4J238 106 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 TMEM272A0A1B0GTI8 110 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 TRDV1A0A1B0GX56 115 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 SMIM30A4D0T7 59 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 LANCL1O43813 399 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 RANBP1P43487 201 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 HLA-DRB3P79483 266 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 CD83Q01151 205 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 LSAMPQ13449 338 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 EBI3Q14213 229 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 TCTEX1D4Q5JR98 221 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 SLC35E3Q7Z769 313 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 ZNF329Q86UD4 541 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 FAM89BQ8N5H3 189 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 Q8N6K4 173 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 MRPL20Q9BYC9 149 aaKnown RBP16.69■□□□□ 0.26
CDKN3-204ENST00000442975 RIMS4Q9H426 269 aaPredicted RBP16.69■□□□□ 0.26
CDKN3-204ENST00000442975 LINC00527Q9UJ94 153 aa16.69■□□□□ 0.26
CDKN3-204ENST00000442975 IFITM5A6NNB3 132 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 FOXI3A8MTJ6 420 aaPredicted RBP16.68■□□□□ 0.26
CDKN3-204ENST00000442975 ST8SIA5O15466 376 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 YPEL1O60688 119 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 RAB3BP20337 219 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 OR3A3P47888 321 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 ZNF880Q6PDB4 577 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 ZNF773Q6PK81 442 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 YPEL2Q96QA6 119 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 CMSS1Q9BQ75 279 aaKnown RBP16.68■□□□□ 0.26
CDKN3-204ENST00000442975 PECRQ9BY49 303 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 SLC23A1Q9UHI7 598 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 HSF4Q9ULV5 492 aa16.68■□□□□ 0.26
CDKN3-204ENST00000442975 RRP15Q9Y3B9 282 aaKnown RBP16.68■□□□□ 0.26
CDKN3-204ENST00000442975 TSSC4Q9Y5U2 329 aaPredicted RBP16.68■□□□□ 0.26
CDKN3-204ENST00000442975 SAA2-SAA4A0A096LPE2 208 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 A0A0B4J203 849 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 G3V4G9 280 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 LDLRAD4O15165 306 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 SAA2P0DJI9 122 aaPredicted RBP16.67■□□□□ 0.26
CDKN3-204ENST00000442975 PLAC9Q5JTB6 97 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 FOXRED2Q8IWF2 684 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 YTHDF1Q9BYJ9 559 aaKnown RBP16.67■□□□□ 0.26
CDKN3-204ENST00000442975 PARP12Q9H0J9 701 aaKnown RBP16.67■□□□□ 0.26
CDKN3-204ENST00000442975 IFI27L2Q9H2X8 130 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 LIN7CQ9NUP9 197 aaKnown RBP16.67■□□□□ 0.26
CDKN3-204ENST00000442975 RAB22AQ9UL26 194 aa16.67■□□□□ 0.26
CDKN3-204ENST00000442975 TRBV6-6A0A0A6YYG2 114 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 HSPA12AO43301 675 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 GPR12P47775 334 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 TMEM50BP56557 158 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 MRPS15P82914 257 aaKnown RBP16.66■□□□□ 0.26
CDKN3-204ENST00000442975 ODF3L1Q8IXM7 274 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 Q8N9W7 124 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 CHPT1Q8WUD6 406 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 RAB3CQ96E17 227 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 S1PR3Q99500 378 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 RASL11BQ9BPW5 248 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 OR1A1Q9P1Q5 309 aa16.66■□□□□ 0.26
CDKN3-204ENST00000442975 A0A075B6Q4 140 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 IGHG2P01859 326 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 GALP22466 123 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 MMDQ15546 238 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 PDLIM3Q53GG5 364 aaPredicted RBP16.65■□□□□ 0.26
CDKN3-204ENST00000442975 ZNF833PQ6ZTB9 187 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 OR8H1Q8NGG4 311 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 Q9N2K0 584 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 MGAT4AQ9UM21 535 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 STUB1Q9UNE7 303 aa16.65■□□□□ 0.26
CDKN3-204ENST00000442975 PF4P02776 101 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 CD3GP09693 182 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 SLC2A2P11168 524 aaPredicted RBP16.64■□□□□ 0.25
CDKN3-204ENST00000442975 GADD45AP24522 165 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 SLC35B1P78383 322 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 MOGAT2Q3SYC2 334 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 LY6G6FQ5SQ64 297 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 NABP2Q9BQ15 211 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 ABCG5Q9H222 651 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 PLSCR3Q9NRY6 295 aa16.64■□□□□ 0.25
CDKN3-204ENST00000442975 TXNL4BQ9NX01 149 aaKnown RBP16.64■□□□□ 0.25
CDKN3-204ENST00000442975 LINC01548A6NM66 108 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 AP4M1O00189 453 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 SCTP09683 121 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 GNB3P16520 340 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 ZBTB25P24278 435 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 F2RL1P55085 397 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 NEDD8Q15843 81 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 RPL39P5Q59GN2 51 aa16.63■□□□□ 0.25
CDKN3-204ENST00000442975 NR2C2APQ86WQ0 139 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms