RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PLPPR2Q96GM1 343 aa10.99□□□□□ -0.65
CPSF4-206ENST00000441580 OR2S2Q9NQN1 319 aa10.99□□□□□ -0.65
CPSF4-206ENST00000441580 CYTL1Q9NRR1 136 aa10.99□□□□□ -0.65
CPSF4-206ENST00000441580 FBXL17Q9UF56 701 aa10.99□□□□□ -0.65
CPSF4-206ENST00000441580 LAMP3Q9UQV4 416 aa10.99□□□□□ -0.65
CPSF4-206ENST00000441580 RNF115Q9Y4L5 304 aa10.99□□□□□ -0.65
CPSF4-206ENST00000441580 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 TANC2Q9HCD6 1990 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 TRGV10A0A0A0MS01 117 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 BORCS7-ASMTA0A0B4J1R7 106 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 TRAV38-1A0A0B4J264 116 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 LGALS8O00214 317 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 F2RL2O00254 374 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 SIGLEC5O15389 551 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 JTBO76095 146 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 TFF1P04155 84 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 PPP1CCP36873 323 aaKnown RBP10.98□□□□□ -0.65
CPSF4-206ENST00000441580 EDDM3BP56851 147 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 VAMP2P63027 116 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 HOXA4Q00056 320 aaPredicted RBP10.98□□□□□ -0.65
CPSF4-206ENST00000441580 SPRNQ5BIV9 151 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 FAM219AQ8IW50 185 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 GALNT11Q8NCW6 608 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 OR52L2PQ8NGH6 319 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 GAFA1Q96PS6 74 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 HSD17B10Q99714 261 aaKnown RBP10.98□□□□□ -0.65
CPSF4-206ENST00000441580 SLC25A31Q9H0C2 315 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 PARP12Q9H0J9 701 aaKnown RBP10.98□□□□□ -0.65
CPSF4-206ENST00000441580 CALYQ9NYX4 217 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 GNG12Q9UBI6 72 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 PRR14LQ5THK1 2151 aa10.98□□□□□ -0.65
CPSF4-206ENST00000441580 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-206ENST00000441580 B9A039 149 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 YPEL1O60688 119 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 CYB5R3P00387 301 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-206ENST00000441580 RAB7AP51149 207 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 BAXQ07812 192 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 EIF4EBP1Q13541 118 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-206ENST00000441580 TOR2AQ5JU69 321 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 ZNF788Q6ZQV5 615 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 HSD17B13Q7Z5P4 300 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-206ENST00000441580 TPRX1Q8N7U7 411 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 KDF1Q8NAX2 398 aaPredicted RBP10.97□□□□□ -0.65
CPSF4-206ENST00000441580 DMBX1Q8NFW5 382 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 YPEL2Q96QA6 119 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 MS4A5Q9H3V2 200 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 LPAR3Q9UBY5 353 aa10.97□□□□□ -0.65
CPSF4-206ENST00000441580 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-206ENST00000441580 FAM90A26D6RGX4 464 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 SSSCA1O60232 199 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 PITX3O75364 302 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 ZNF16P17020 682 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-206ENST00000441580 APOBEC3AP31941 199 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-206ENST00000441580 GPR12P47775 334 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 ADORA2A-AS1P86434 159 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 AANATQ16613 207 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 OR2C3Q8N628 320 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 UBAC2Q8NBM4 344 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-206ENST00000441580 ZNRF1Q8ND25 227 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 CD300LFQ8TDQ1 290 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 RNF141Q8WVD5 230 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.65
CPSF4-206ENST00000441580 TCTEX1D2Q8WW35 142 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 CXorf58Q96LI9 332 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 RAB40CQ96S21 281 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 GPHA2Q96T91 129 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 LYRM2Q9NU23 88 aaPredicted RBP10.96□□□□□ -0.65
CPSF4-206ENST00000441580 SDHAF2Q9NX18 166 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 COA4Q9NYJ1 87 aa10.96□□□□□ -0.65
CPSF4-206ENST00000441580 RAI1Q7Z5J4 1906 aaPredicted RBP10.96□□□□□ -0.66
CPSF4-206ENST00000441580 MFSD2BA6NFX1 497 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 NUDT19A8MXV4 375 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 E7EQL1 145 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 I3L521 148 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 KCNAB3O43448 404 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 EPHA1P21709 976 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 KIR2DS2P43631 304 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 TMEM33P57088 247 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 CCL8P80075 99 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 EWSR1Q01844 656 aaKnown RBP eCLIP10.95□□□□□ -0.66
CPSF4-206ENST00000441580 ID3Q02535 119 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 ZNF266Q14584 549 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 Q3ZCU0 254 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 FAM74A1Q5RGS3 127 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 ZNF808Q8N4W9 903 aaPredicted RBP10.95□□□□□ -0.66
CPSF4-206ENST00000441580 EIF4E3Q8N5X7 224 aaKnown RBP10.95□□□□□ -0.66
CPSF4-206ENST00000441580 PSG11Q9UQ72 335 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 MMP24Q9Y5R2 645 aa10.95□□□□□ -0.66
CPSF4-206ENST00000441580 IGHV3-43A0A0B4J1X8 118 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 KBTBD11-OT1A0A1B0GTJ5 212 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 hADV38S2A0JD32 116 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 TMEM178BH3BS89 294 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 ST8SIA5O15466 376 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 FGF16O43320 207 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 IGKV1-39P01597 117 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 GYPAP02724 150 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 IGKV1D-39P04432 117 aa10.94□□□□□ -0.66
CPSF4-206ENST00000441580 IGHV3-43DP0DP04 118 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms