RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SIRPDQ9H106 197 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 MMP28Q9H239 520 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 NUDT15Q9NV35 164 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 NUBP2Q9Y5Y2 271 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 NOTCH2Q04721 2471 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 ECI1P42126 302 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 ZNF134P52741 427 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 SURF2Q15527 256 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-204ENST00000441350 Q3ZCU0 254 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 PLET1Q6UQ28 207 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 BTNL3Q6UXE8 466 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 ZDHHC22Q8N966 263 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 LINC01356Q8N9X3 169 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 AGMATQ9BSE5 352 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 SUCNR1Q9BXA5 334 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 C20orf85Q9H1P6 137 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 TMEM133Q9H2Q1 129 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 METTL8Q9H825 291 aaKnown RBP17.25■□□□□ 0.35
VPS13B-204ENST00000441350 UNKLQ9H9P5 680 aaKnown RBP17.25■□□□□ 0.35
VPS13B-204ENST00000441350 GPR132Q9UNW8 380 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 PSG11Q9UQ72 335 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 VSIG4Q9Y279 399 aa17.25■□□□□ 0.35
VPS13B-204ENST00000441350 IGHV3-7P01780 117 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 OR8U9P0C7N5 309 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 PRTN3P24158 256 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 CD34P28906 385 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 LUMP51884 338 aaPredicted RBP17.24■□□□□ 0.35
VPS13B-204ENST00000441350 PAX8Q06710 450 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 OR2AK2Q8NG84 335 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 OR8U1Q8NH10 309 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 FAM216AQ8WUB2 273 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 TOMM40LQ969M1 308 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 CREB3L1Q96BA8 519 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 UPRTQ96BW1 309 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 MARVELD1Q9BSK0 173 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 FLVCR2Q9UPI3 526 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.24■□□□□ 0.354e-8■■■■■ 30.4
VPS13B-204ENST00000441350 CREBBPQ92793 2442 aa17.24■□□□□ 0.35
VPS13B-204ENST00000441350 MMP9P14780 707 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 DLX1P56177 255 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 BAMBIQ13145 260 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 TMEM249Q2WGJ8 235 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 CT45A1Q5HYN5 189 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 C8orf31Q8N9H6 132 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 CT45A3Q8NHU0 189 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 SECTM1Q8WVN6 248 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 SCGB3A2Q96PL1 93 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 SLC5A7Q9GZV3 580 aa17.23■□□□□ 0.35
VPS13B-204ENST00000441350 TRAV6A0A075B6T7 132 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 TRAV20A0A0B4J274 112 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 SLC31A2O15432 143 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 GNRHRP30968 328 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 METTL11BQ5VVY1 283 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 SLC25A48Q6ZT89 311 aaKnown RBP17.22■□□□□ 0.35
VPS13B-204ENST00000441350 ZNF596Q8TC21 504 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 TNFRSF14Q92956 283 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 MSI2Q96DH6 328 aaKnown RBP17.22■□□□□ 0.35
VPS13B-204ENST00000441350 RSRP1Q9BUV0 290 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 C5orf66Q9H5L9 145 aa17.22■□□□□ 0.35
VPS13B-204ENST00000441350 ARPC1BO15143 372 aaKnown RBP17.21■□□□□ 0.35
VPS13B-204ENST00000441350 ST8SIA5O15466 376 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 H2AFB2P0C5Z0 115 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 IGHV4-31P0DP07 118 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 PGAM2P15259 253 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 LPCAT3Q6P1A2 487 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 SLC38A6Q8IZM9 456 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 ABHD12Q8N2K0 398 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 ZFAND1Q8TCF1 268 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 TMEM186Q96B77 213 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 RTBDNQ9BSG5 229 aaPredicted RBP17.21■□□□□ 0.35
VPS13B-204ENST00000441350 ABHD14AQ9BUJ0 271 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 IFI27L2Q9H2X8 130 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 SIRT7Q9NRC8 400 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 IGHV2-26A0A0B4J1V2 119 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 A0A1W2PPE3 182 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 IGLV2-14P01704 120 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 CTSDP07339 412 aaPredicted RBP17.21■□□□□ 0.35
VPS13B-204ENST00000441350 GNG10P50151 68 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 RAB7AP51149 207 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 MECP2P51608 486 aaKnown RBP17.21■□□□□ 0.35
VPS13B-204ENST00000441350 VMO1Q7Z5L0 202 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 CIARTQ8N365 385 aaPredicted RBP17.21■□□□□ 0.35
VPS13B-204ENST00000441350 LINC00311Q8N616 119 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 OR9G1Q8NH87 305 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 CCL28Q9NRJ3 127 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 RNF150Q9ULK6 438 aa17.21■□□□□ 0.35
VPS13B-204ENST00000441350 RBM7Q9Y580 266 aaKnown RBP17.21■□□□□ 0.35
VPS13B-204ENST00000441350 J3QR06 171 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 TOX4O94842 621 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 RLN1P04808 185 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 PI3P19957 117 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 GATA3P23771 443 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 GZMKP49863 264 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 RAG2P55895 527 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 PRB3Q04118 309 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-204ENST00000441350 DCAF12L2Q5VW00 463 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 HCP5Q6MZN7 132 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 TBX15Q96SF7 602 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 CLEC7AQ9BXN2 247 aa17.2■□□□□ 0.34
VPS13B-204ENST00000441350 OR2D2Q9H210 308 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms