RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 PITPNAQ00169 270 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 SCN1BQ07699 218 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 KLF9Q13886 244 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF181Q2M3W8 571 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 CT83Q5H943 113 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 KLF17Q5JT82 389 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 SPIN3Q5JUX0 258 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ATAD3CQ5T2N8 411 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 HACD4Q5VWC8 232 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 STUMQ69YW2 141 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 RAB12Q6IQ22 244 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 LINC00596Q86U02 117 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 FAM90A1Q86YD7 464 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 THNSL2Q86YJ6 484 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 OR8H2Q8N162 312 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 Q8N402 240 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 GVQW1Q8N7I0 195 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 FAM216BQ8N7L0 139 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 SUMF2Q8NBJ7 301 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 CLRN3Q8NCR9 226 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 DEFB108BQ8NET1 73 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 OR11L1Q8NGX0 322 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ANGPTL6Q8NI99 470 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 MAFIPQ8WZ33 124 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 CCL17Q92583 94 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 TIMD4Q96H15 378 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 RAX2Q96IS3 184 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 GAFA1Q96PS6 74 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 NEDD4LQ96PU5 975 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 THAP7Q9BT49 309 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 DPCDQ9BVM2 203 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 CHIAQ9BZP6 476 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 EGLN1Q9GZT9 426 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 SEBOXQ9HB31 216 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 PCDHB16Q9NRJ7 776 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 DECR2Q9NUI1 292 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 PLEKHJ1Q9NW61 149 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 RASL12Q9NYN1 266 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 CTSZQ9UBR2 303 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 KLK11Q9UBX7 282 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 MTFP1Q9UDX5 166 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 OR14J1Q9UGF5 321 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF230Q9UIE0 474 aaPredicted RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 RPUSD1Q9UJJ7 312 aaKnown RBP3.88□□□□□ -1.79
PTPN4-206ENST00000441089 HSF4Q9ULV5 492 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 WIPI2Q9Y4P8 454 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 MAB21L2Q9Y586 359 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 NPTNQ9Y639 398 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
PTPN4-206ENST00000441089 TRAV39A0A0B4J263 110 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 LINC00854A0A1B0GVQ3 168 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 OOEPA6NGQ2 149 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SERPINE3A8MV23 424 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SULT1C2O00338 296 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SH2D1BO14796 132 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 DEGS1O15121 323 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 CA11O75493 328 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SCGNO76038 276 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 NAPSAO96009 420 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 IGHV2-70P01814 119 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 FCGR3AP08637 254 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF735P0CB33 412 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 PPIAL4GP0DN37 164 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SPNP16150 400 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 PRDX2P32119 198 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 BTCP35070 178 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 GABRA2P47869 451 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 RFX2P48378 723 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 GNG2P59768 71 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 LCN2P80188 198 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 MRPS10P82664 201 aaKnown RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 NHLH2Q02577 135 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ARFRP1Q13795 201 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ATXN7L3Q14CW9 347 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 HERPUD1Q15011 391 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ZMYND11Q15326 602 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 PNLIPRP3Q17RR3 467 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SMIM21Q3B7S5 101 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 PAN3Q58A45 887 aaKnown RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 AVPI1Q5T686 147 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 RSBN1Q5VWQ0 802 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 OR52W1Q6IF63 320 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 FAAP20Q6NZ36 180 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF880Q6PDB4 577 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 LYPD2Q6UXB3 125 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 Q6YL49 198 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ZNF788Q6ZQV5 615 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 TCF23Q7RTU1 214 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 TRAPPC6BQ86SZ2 158 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 HOGA1Q86XE5 327 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 GAPTQ8N292 157 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 ZNRF1Q8ND25 227 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 OR4D10Q8NGI6 311 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 OR4K15Q8NH41 348 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 MRPL30Q8TCC3 161 aaKnown RBP3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SSMEM1Q8WWF3 244 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 SNAPC3Q92966 411 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 COQ2Q96H96 371 aa3.87□□□□□ -1.79
PTPN4-206ENST00000441089 CCL13Q99616 98 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms