RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 JPT1Q9UK76 154 aa9.82□□□□□ -0.84
SMAD3-202ENST00000439724 SESN1Q9Y6P5 492 aa9.82□□□□□ -0.84
SMAD3-202ENST00000439724 MGAQ8IWI9 3026 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 A0A0G2JRQ6 117 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 DSCAMO60469 2012 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 MUC1P15941 1255 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-202ENST00000439724 PPP1CCP36873 323 aaKnown RBP9.81□□□□□ -0.84
SMAD3-202ENST00000439724 POLR2GP62487 172 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMAD3-202ENST00000439724 CATR1Q13166 79 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 CXorf66Q5JRM2 361 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-202ENST00000439724 TEX36Q5VZQ5 186 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 ADAM5Q6NVV9 412 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 OR2C3Q8N628 320 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 TCTEX1D1Q8N7M0 179 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 KDF1Q8NAX2 398 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-202ENST00000439724 UBAC2Q8NBM4 344 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 ZNRF1Q8ND25 227 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 RNF141Q8WVD5 230 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 C14orf79Q96F83 325 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 C5orf30Q96GV9 206 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 FAM234AQ9H0X4 552 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 ARV1Q9H2C2 271 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 ESRP2Q9H6T0 727 aaKnown RBP9.81□□□□□ -0.84
SMAD3-202ENST00000439724 RAB9BQ9NP90 201 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 OR6C3Q9NZP0 311 aa9.81□□□□□ -0.84
SMAD3-202ENST00000439724 PLCE1Q9P212 2302 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 DYSFO75923 2080 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 A8MXK9 166 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 SHISA9B4DS77 424 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 F2RL2O00254 374 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 CYB5R3P00387 301 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-202ENST00000439724 IGKV1-5P01602 117 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 FAM157CP0CG43 387 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 CGB3P0DN86 165 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 CGB7P0DN87 165 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 IRF2P14316 349 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 ZNF16P17020 682 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-202ENST00000439724 CHRNB4P30926 498 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 FAM209AQ5JX71 171 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 FAM201AQ5SY85 155 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 FAM53AQ6NSI3 398 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-202ENST00000439724 ZNF66Q6ZN08 573 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 RNASE11Q8TAA1 199 aaKnown RBP9.8□□□□□ -0.84
SMAD3-202ENST00000439724 EDARADDQ8WWZ3 215 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 GAFA1Q96PS6 74 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 ZNF665Q9H7R5 613 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 LYRM2Q9NU23 88 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-202ENST00000439724 RNF150Q9ULK6 438 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 ARID1AO14497 2285 aa9.8□□□□□ -0.84
SMAD3-202ENST00000439724 RAI1Q7Z5J4 1906 aaPredicted RBP9.8□□□□□ -0.84
SMAD3-202ENST00000439724 PRRC2CQ9Y520 2896 aaKnown RBP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 DSCAML1Q8TD84 2053 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 BORCS7-ASMTA0A0B4J1R7 106 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 IGHV3-43A0A0B4J1X8 118 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 ATXN7O15265 892 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 SHOXO15266 292 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 SSSCA1O60232 199 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 YPEL1O60688 119 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 IGHV3-43DP0DP04 118 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 EPHA1P21709 976 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 ZP3P21754 424 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 AKR1C2P52895 323 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 VAMP2P63027 116 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 EWSR1Q01844 656 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 TLE1Q04724 770 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 ZNF788Q6ZQV5 615 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 CCDC28AQ8IWP9 274 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 DMRTC2Q8IXT2 367 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 RFESDQ8TAC1 157 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 RNASE6Q93091 150 aaKnown RBP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 BSCL2Q96G97 398 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 YPEL2Q96QA6 119 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 AGMATQ9BSE5 352 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 SMIM3Q9BZL3 60 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 EGLN1Q9GZT9 426 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 SLC25A31Q9H0C2 315 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 RNF115Q9Y4L5 304 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 RP1L1Q8IWN7 2480 aaPredicted RBP9.79□□□□□ -0.84
SMAD3-202ENST00000439724 TANC2Q9HCD6 1990 aa9.79□□□□□ -0.84
SMAD3-202ENST00000439724 CACNA1DQ01668 2161 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 IGSF23A1L1A6 192 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 FAM24AA6NFZ4 105 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 LRRC30A6NM36 301 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 KIAA1324LA8MWY0 1029 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-202ENST00000439724 WRBO00258 174 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 CCL21O00585 134 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 ITGB1BP1O14713 200 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 C1QTNF9P0C862 333 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 LPAR6P43657 344 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 SULT1A2P50226 295 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 EDDM3BP56851 147 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 LOXL3P58215 753 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 RPL30P62888 115 aaKnown RBP9.78□□□□□ -0.84
SMAD3-202ENST00000439724 CCL8P80075 99 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 MORN2Q502X0 79 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 Q6ZRM9 215 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 TMEM252Q8N6L7 170 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 SAT2Q96F10 170 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-202ENST00000439724 PLPPR2Q96GM1 343 aa9.78□□□□□ -0.84
SMAD3-202ENST00000439724 HSD17B10Q99714 261 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms