RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PAX8Q06710 450 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 DAZ2Q13117 558 aaKnown RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 HERPUD1Q15011 391 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR8G1Q15617 311 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 KCNJ8Q15842 424 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 NEDD8Q15843 81 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 TAF9Q16594 264 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 OCIAD2Q56VL3 154 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 CENPWQ5EE01 88 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 WDR38Q5JTN6 314 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 LCN8Q6JVE9 175 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 TEX43Q6ZNM6 134 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 Q6ZSR6 202 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 LINC00173Q6ZV60 143 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 VN1R4Q7Z5H5 301 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 DAZ4Q86SG3 579 aaKnown RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 EXOC3-AS1Q8N2X6 119 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM178AQ8NBL3 297 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 TSTD1Q8NFU3 115 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR11H7Q8NGC8 314 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR8S1Q8NH09 359 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 CT55Q8WUE5 264 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 MBD3L1Q8WWY6 194 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 KLK6Q92876 244 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 PLEKHB2Q96CS7 222 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC25A44Q96H78 314 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC35G5Q96KT7 338 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 FCRL1Q96LA6 429 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 CNBD2Q96M20 576 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 GPR82Q96P67 336 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR2M2Q96R28 347 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 LRRC61Q9BV99 259 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 C19orf24Q9BVV8 132 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 MOB1AQ9H8S9 216 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 POPDC3Q9HBV1 291 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 DAZ1Q9NQZ3 744 aaKnown RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 DAZ3Q9NR90 486 aaKnown RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 PRTFDC1Q9NRG1 225 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF629Q9UEG4 869 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 ERG28Q9UKR5 140 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 EIF4G3O43432 1585 aaKnown RBP2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 HECW2Q9P2P5 1572 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 CACNA1SQ13698 1873 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 UHRF1BP1LA0JNW5 1464 aa2.77□□□□□ -1.97
HMGB1P12-201ENST00000438594 PLCH2O75038 1416 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 CASKIN1Q8WXD9 1431 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 ABCC12Q96J65 1359 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 ROBO3Q96MS0 1386 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 IBTKQ9P2D0 1353 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 MYH3P11055 1940 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 NESP48681 1621 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 SHROOM2Q13796 1616 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGHV1OR15-1A0A075B7D0 117 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 SMIM26A0A096LP01 95 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGKV1-8A0A0C4DH67 115 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 A0A1W2PS18 150 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 C5orf49A4QMS7 147 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 PGPA6NDG6 321 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 KLLNB2CW77 178 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 MYL12BO14950 172 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 DUS4LO95620 317 aaKnown RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 FAM107AO95990 144 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 C8GP07360 202 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 NPY1RP25929 384 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 CNTFRP26992 372 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 S100A11P31949 105 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 PSMB2P49721 201 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 POLR2HP52434 150 aaKnown RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF138P52744 262 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC18A1P54219 525 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 CCL23P55773 120 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 GFERP55789 205 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 TAS2R46P59540 309 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 SELENOWP63302 87 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 FABP5Q01469 135 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 HIST1H1AQ02539 215 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM267Q0VDI3 215 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 ARFRP1Q13795 201 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 C12orf74Q32Q52 190 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 C6orf99Q4VX62 202 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 MORN2Q502X0 79 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 FAM222AQ5U5X8 452 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 LCN12Q6JVE5 192 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 CXCL17Q6UXB2 119 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 Q6ZRP5 223 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 CLEC20AQ6ZU45 233 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 DEFB128Q7Z7B8 93 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 C11orf53Q8IXP5 236 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF433Q8N7K0 673 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 GDPD1Q8N9F7 314 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZIC4Q8N9L1 334 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR5A1Q8NGJ0 315 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR1L1Q8NH94 360 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 DCUN1D4Q92564 292 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 STARD4Q96DR4 205 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 SMIM8Q96KF7 97 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM147Q9BVK8 224 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 GABARAPL3Q9BY60 117 aa2.76□□□□□ -1.97
HMGB1P12-201ENST00000438594 LINC00470Q9BZP3 86 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms