RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IGKV1D-33P01593 117 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 IGKV1-33P01594 117 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 CD3GP09693 182 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 SLC2A2P11168 524 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-207ENST00000435455 CD1BP29016 333 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 HLA-DRB3P79483 266 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 EBI3Q14213 229 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 TIMM50Q3ZCQ8 353 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 ABCA11PQ4W5N1 156 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 PLAC9Q5JTB6 97 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 TREML4Q6UXN2 200 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 Q6ZPA2 131 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 C5orf24Q7Z6I8 188 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 IZUMO1Q8IYV9 350 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 OR2AK2Q8NG84 335 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 HDHD3Q9BSH5 251 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-207ENST00000435455 Q9N2K0 584 aa12.97□□□□□ -0.33
SMPD4-207ENST00000435455 FGF16O43320 207 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 SDC2P34741 201 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 HNF4GQ14541 408 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 C2orf68Q2NKX9 166 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 Q6ZS46 218 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 LYG1Q8N1E2 194 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 OR2T10Q8NGZ9 312 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 DAPK2Q9UIK4 370 aa12.96□□□□□ -0.33
SMPD4-207ENST00000435455 IGHV3-72A0A0B4J1Y9 119 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 RAB27BO00194 218 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 AMY1AP04745 511 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 AMY2AP04746 511 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 ARL6IP1Q15041 203 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 SFXN4Q6P4A7 337 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 EAF1Q96JC9 268 aaPredicted RBP12.95□□□□□ -0.34
SMPD4-207ENST00000435455 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
SMPD4-207ENST00000435455 SERPINE3A8MV23 424 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 MFNGO00587 321 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 ITGB1BP1O14713 200 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 HSPA12AO43301 675 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 RRP9O43818 475 aaKnown RBP12.94□□□□□ -0.34
SMPD4-207ENST00000435455 FBXO24O75426 580 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 SCGNO76038 276 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 MOSP00540 346 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 HIST1H1DP16402 221 aaKnown RBP12.94□□□□□ -0.34
SMPD4-207ENST00000435455 MXD1Q05195 221 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 TMEM95Q3KNT9 176 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 C9orf152Q5JTZ5 239 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 C5orf56Q8N8D9 126 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 WIPF2Q8TF74 440 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-207ENST00000435455 EDARADDQ8WWZ3 215 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 RNF167Q9H6Y7 350 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 SLC23A1Q9UHI7 598 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
SMPD4-207ENST00000435455 A0A075B6Q4 140 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 TRDCB7Z8K6 153 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 FCGR3AP08637 254 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 GNB3P16520 340 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 ZBTB25P24278 435 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 SCAND1P57086 179 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 LSAMPQ13449 338 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 KIR2DS1Q14954 304 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 Q8N6K4 173 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 C11orf44Q8N8P7 122 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 OR8H1Q8NGG4 311 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 OR4A4PQ8NGN8 299 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 MMP27Q9H306 513 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 PIPOXQ9P0Z9 390 aa12.93□□□□□ -0.34
SMPD4-207ENST00000435455 TRIM64CA6NLI5 447 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 NCBP2LA6PVI3 153 aaKnown RBP12.92□□□□□ -0.34
SMPD4-207ENST00000435455 RAB29O14966 203 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 AIREO43918 545 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 TMEM127O75204 238 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 CSF1P09603 554 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 SCTP09683 121 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 CLEC2LP0C7M8 214 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 SNRPBP14678 240 aaKnown RBP12.92□□□□□ -0.34
SMPD4-207ENST00000435455 TALDO1P37837 337 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 CEACAM6P40199 344 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 ARFRP1Q13795 201 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 ZNF833PQ6ZTB9 187 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 ODF3L1Q8IXM7 274 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 LGALS14Q8TCE9 139 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 S1PR3Q99500 378 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 IFI27L2Q9H2X8 130 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMPD4-207ENST00000435455 ETV7Q9Y603 341 aa12.92□□□□□ -0.34
SMPD4-207ENST00000435455 SAA2-SAA4A0A096LPE2 208 aa12.91□□□□□ -0.34
SMPD4-207ENST00000435455 SH2D7A6NKC9 451 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-207ENST00000435455 ZNF736B4DX44 427 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-207ENST00000435455 ST8SIA5O15466 376 aa12.91□□□□□ -0.34
SMPD4-207ENST00000435455 DIRAS3O95661 229 aa12.91□□□□□ -0.34
SMPD4-207ENST00000435455 SAA2P0DJI9 122 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-207ENST00000435455 OR3A3P47888 321 aa12.91□□□□□ -0.34
SMPD4-207ENST00000435455 SERPINB10P48595 397 aa12.91□□□□□ -0.34
SMPD4-207ENST00000435455 CDNFQ49AH0 187 aa12.91□□□□□ -0.34
SMPD4-207ENST00000435455 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms