RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MRGPRGQ86SM5 289 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 CCDC71LQ8N9Z2 235 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 PIGLQ9Y2B2 252 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 CBR3O75828 277 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 SERF1AO75920 110 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 TDGF1P13385 188 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 CD46P15529 392 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 DAP3P51398 398 aaKnown RBP6.43□□□□□ -1.38
CPSF6-202ENST00000435070 GABREP78334 506 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 TPTE2P1Q5T6R2 138 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 LILRA6Q6PI73 481 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 ASB10Q8WXI3 467 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 BMFQ96LC9 184 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 C20orf144Q9BQM9 153 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 KBTBD11O94819 623 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 SLC25A6P12236 298 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 CBLN1P23435 193 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 UBE2G2P60604 165 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 SELENOTP62341 195 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 OR8G2PQ6IF36 304 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 OR51H1Q8NH63 302 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 SPIN2AQ99865 258 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 SPIN2BQ9BPZ2 258 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 WNT10AQ9GZT5 417 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 SPINK4O60575 86 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 ADMP35318 185 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 MDH2P40926 338 aaKnown RBP6.43□□□□□ -1.38
CPSF6-202ENST00000435070 CDKN1BP46527 198 aa6.43□□□□□ -1.38
CPSF6-202ENST00000435070 KLF3P57682 345 aaPredicted RBP6.43□□□□□ -1.38
CPSF6-202ENST00000435070 MRPL13Q9BYD1 178 aaKnown RBP6.43□□□□□ -1.38
CPSF6-202ENST00000435070 G3V3Y1 287 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SH2D1BO14796 132 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 DRD1P21728 446 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 CXCL12P48061 93 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 DCAF12Q5T6F0 453 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SAXO1Q8IYX7 474 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 CISD2Q8N5K1 135 aaKnown RBP6.42□□□□□ -1.38
CPSF6-202ENST00000435070 OR2V1Q8NHB1 315 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PIGCQ92535 297 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 OOEPA6NGQ2 149 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 TPPP2P59282 170 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 RANP62826 216 aaKnown RBP6.42□□□□□ -1.38
CPSF6-202ENST00000435070 FUT7Q11130 342 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SPATA45Q537H7 98 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 FFAR4Q5NUL3 377 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PET117Q6UWS5 81 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SGMS2Q8NHU3 365 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PSMF1Q92530 271 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 KCNK17Q96T54 332 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 ASXL3Q9C0F0 2248 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 A0A0J9YY10 115 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 NTF3P20783 257 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 LDLRAD2Q5SZI1 272 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF468Q5VIY5 522 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-202ENST00000435070 RTL10Q7L3V2 364 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 DOK3Q7L591 496 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SLC24A4Q8NFF2 622 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 OR5AU1Q8NGC0 362 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 OR2AE1Q8NHA4 323 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 STARD4Q96DR4 205 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SLC7A10Q9NS82 523 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 LAMTOR2Q9Y2Q5 125 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 TNFSF14O43557 240 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PAGE4O60829 102 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 OR7C1O76099 320 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PPYP01298 95 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 THBS3P49746 956 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SPANXN5Q5MJ07 72 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 SCCPDHQ8NBX0 429 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PSMG3Q9BT73 122 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-202ENST00000435070 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 TPPP3Q9BW30 176 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 RNF115Q9Y4L5 304 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 C1QTNF9P0C862 333 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PMCHP20382 165 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PSMB3P49720 205 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 PPP1CBP62140 327 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 H1FNTQ75WM6 255 aaPredicted RBP6.42□□□□□ -1.38
CPSF6-202ENST00000435070 NHLRC2Q8NBF2 726 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 GABRG3Q99928 467 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 TMEM204Q9BSN7 226 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 CLDN16Q9Y5I7 305 aa6.42□□□□□ -1.38
CPSF6-202ENST00000435070 UBE2L5PA0A1B0GUS4 154 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 A0A1B0GV72 72 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 CD300LBA8K4G0 201 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 TCN2P20062 427 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 SPINK2P20155 84 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 GNB1P62873 340 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 GAPTQ8N292 157 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 OR10G4Q8NGN3 311 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 WIPI2Q9Y4P8 454 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 LOC105371242A0A075B767 164 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 OBSL1O75147 1896 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 PSMB2P49721 201 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 MSMO1Q15800 293 aa6.41□□□□□ -1.38
CPSF6-202ENST00000435070 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms