RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C14orf79Q96F83 325 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 CLCC1Q96S66 551 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 TUBA4BQ9H853 241 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 TUBG2Q9NRH3 451 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 RNF212BA8MTL3 300 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 SYNGR2O43760 224 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 CCL20P78556 96 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 RHEBQ15382 184 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 C11orf53Q8IXP5 236 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 CXXC4Q9H2H0 198 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 KCNIP1Q9NZI2 227 aa15.65■□□□□ 0.1
CLK1-205ENST00000434813 CACNA1GO43497 2377 aa15.64■□□□□ 0.09
CLK1-205ENST00000434813 RBFOX3A6NFN3 312 aa15.64■□□□□ 0.09
CLK1-205ENST00000434813 AGFG2O95081 481 aa15.64■□□□□ 0.09
CLK1-205ENST00000434813 SNRNP70P08621 437 aaKnown RBP15.64■□□□□ 0.09
CLK1-205ENST00000434813 AKR1C3P42330 323 aa15.64■□□□□ 0.09
CLK1-205ENST00000434813 TMEM267Q0VDI3 215 aaPredicted RBP15.64■□□□□ 0.09
CLK1-205ENST00000434813 M0R036 132 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 ZNF16P17020 682 aaPredicted RBP15.63■□□□□ 0.09
CLK1-205ENST00000434813 KITLGP21583 273 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 ACSF3Q4G176 576 aaPredicted RBP15.63■□□□□ 0.09
CLK1-205ENST00000434813 SLC35E4Q6ICL7 350 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 ZNF645Q8N7E2 425 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 ZBTB34Q8NCN2 500 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 RARRES2Q99969 163 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 BIN3Q9NQY0 253 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 C12orf77C9JDV5 145 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 KLK10O43240 276 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 IFNA5P01569 189 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 TLE4Q04727 773 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 OR1L1Q8NH94 360 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 PRR7Q8TB68 274 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 HIST1H2BAQ96A08 127 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 COA4Q9NYJ1 87 aa15.63■□□□□ 0.09
CLK1-205ENST00000434813 WNT9BO14905 357 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 IGLV1-44P01699 117 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 CECR9P0C854 216 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 OR13C7P0DN81 318 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 ACP7Q6ZNF0 438 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 ZNF826PQ6ZT77 177 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 CXorf67Q86X51 503 aaPredicted RBP15.62■□□□□ 0.09
CLK1-205ENST00000434813 LINC00518Q8N0U6 118 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 CD300LFQ8TDQ1 290 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 GALMQ96C23 342 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 BCL2L14Q9BZR8 327 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 TOLLIPQ9H0E2 274 aa15.62■□□□□ 0.09
CLK1-205ENST00000434813 UNKLQ9H9P5 680 aaKnown RBP15.62■□□□□ 0.09
CLK1-205ENST00000434813 OOEPA6NGQ2 149 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 FAM90A26D6RGX4 464 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 TIMM8AO60220 97 aaPredicted RBP15.61■□□□□ 0.09
CLK1-205ENST00000434813 CEACAM4O75871 244 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 HBE1P02100 147 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 IAPPP10997 89 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 OR3A1P47881 315 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 SOHLH1Q5JUK2 328 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 WDR82Q6UXN9 313 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 RBMXL1Q96E39 390 aaKnown RBP15.61■□□□□ 0.09
CLK1-205ENST00000434813 C20orf24Q9BUV8 137 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 PLSCR4Q9NRQ2 329 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 PSENENQ9NZ42 101 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 SPTBN4Q9H254 2564 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 HOXA1P49639 335 aaPredicted RBP15.61■□□□□ 0.09
CLK1-205ENST00000434813 FOXF2Q12947 444 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 MSMO1Q15800 293 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 RNF212Q495C1 297 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 SLC25A24Q6NUK1 477 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 Q6ZR03 302 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 ZADH2Q8N4Q0 377 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 MMP24Q9Y5R2 645 aa15.61■□□□□ 0.09
CLK1-205ENST00000434813 DCHS1Q96JQ0 3298 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 A6NLC8 198 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 MT-ND4LP03901 98 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 IL2RGP31785 369 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 RAB2AP61019 212 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 EIF4EBP1Q13541 118 aaPredicted RBP15.6■□□□□ 0.09
CLK1-205ENST00000434813 ZNF506Q5JVG8 444 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 PRAMEF6Q5VXH4 476 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 THNSL2Q86YJ6 484 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 ZNF525Q8N782 197 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 COQ2Q96H96 371 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 OR2D2Q9H210 308 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 FRYQ5TBA9 3013 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 TRAV1-1A0A0B4J248 108 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 HBZP02008 142 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 RAB5BP61020 215 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 HBG1P69891 147 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 HBG2P69892 147 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 AESQ08117 197 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 HABP2Q14520 560 aaPredicted RBP15.6■□□□□ 0.09
CLK1-205ENST00000434813 MBNL2Q5VZF2 373 aaKnown RBP15.6■□□□□ 0.09
CLK1-205ENST00000434813 FGFRL1Q8N441 504 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 SFT2D1Q8WV19 159 aa15.6■□□□□ 0.09
CLK1-205ENST00000434813 PSMG3Q9BT73 122 aaPredicted RBP15.6■□□□□ 0.09
CLK1-205ENST00000434813 IGHV2OR16-5A0A0B4J2B6 119 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 A0A1B0GWJ7 208 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 AHRRA9YTQ3 701 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 IFNL4K9M1U5 179 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 TNFSF13O75888 250 aa15.59■□□□□ 0.09
CLK1-205ENST00000434813 SCAF4O95104 1147 aaKnown RBP15.59■□□□□ 0.09
CLK1-205ENST00000434813 HSPB1P04792 205 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms