RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 INO80CQ6PI98 192 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-207ENST00000433762 WDR86Q86TI4 376 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF645Q8N7E2 425 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 IL1F10Q8WWZ1 152 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 CDH20Q9HBT6 801 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 HSPB7Q9UBY9 170 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 VAX2Q9UIW0 290 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 WDR87Q6ZQQ6 2873 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 TMEM30CPA0ZSE6 113 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-207ENST00000433762 P0C879 139 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 CDX1P47902 265 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-207ENST00000433762 TMEM267Q0VDI3 215 aaPredicted RBP11.54□□□□□ -0.56
COL6A3-207ENST00000433762 DNLZQ5SXM8 178 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 RBMS3Q6XE24 437 aaKnown RBP11.54□□□□□ -0.56
COL6A3-207ENST00000433762 DRAM1Q8N682 238 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 ZNF610Q8N9Z0 462 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 NANPQ8TBE9 248 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 MRPL37Q9BZE1 423 aaKnown RBP11.54□□□□□ -0.56
COL6A3-207ENST00000433762 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 LAMP3Q9UQV4 416 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 R4GN57 208 aa11.54□□□□□ -0.56
COL6A3-207ENST00000433762 MED12LQ86YW9 2145 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 TRGV5A0A0B4J1U4 118 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 A0A1W2PNU3 283 aaPredicted RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 A0A1W2PR80 420 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 CYB5R3P00387 301 aaPredicted RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 MBP02144 154 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 FABP1P07148 127 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 NQO2P16083 231 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 RPS10P46783 165 aaKnown RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 OR2B8PP59922 312 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 PAX5Q02548 391 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 EIF4EBP1Q13541 118 aaPredicted RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 KIAA0141Q14154 515 aaPredicted RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 LINC00696Q6ZRV3 163 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 HAPLN4Q86UW8 402 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 TMEM178AQ8NBL3 297 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 Q8WTZ3 238 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 OR14J1Q9UGF5 321 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 ELOA3CA0A087WX78 387 aaPredicted RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 SOX15O60248 233 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 CLN5O75503 358 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 NXPH2O95156 264 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 CATR1Q13166 79 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 CA5BP1Q8WTZ4 195 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 ARRDC1-AS1Q9H2J1 176 aa11.53□□□□□ -0.56
COL6A3-207ENST00000433762 RBM7Q9Y580 266 aaKnown RBP11.53□□□□□ -0.56
COL6A3-207ENST00000433762 DNAJC13O75165 2243 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 OOEPA6NGQ2 149 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 SIRPB1O00241 398 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 TNFRSF9Q07011 255 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 IGFBP7Q16270 282 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 C1orf174Q8IYL3 243 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 WDR31Q8NA23 367 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 C1orf162Q8NEQ5 155 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-207ENST00000433762 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.57
COL6A3-207ENST00000433762 CIB3Q96Q77 187 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-207ENST00000433762 SMOC1Q9H4F8 434 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 GNG13Q9P2W3 67 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 KCNS2Q9ULS6 477 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 PPP1R3CQ9UQK1 317 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 TRBV24-1A0A075B6N3 115 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 ARGFXA6NJG6 315 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 CLDN34H7C241 214 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 HAND1O96004 215 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 CD59P13987 128 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 CEACAM6P40199 344 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 CD81P60033 236 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 UBE2NP61088 152 aaKnown RBP11.52□□□□□ -0.57
COL6A3-207ENST00000433762 ZNF726P1Q15940 193 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 FGFRL1Q8N441 504 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 GALMQ96C23 342 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 RSG1Q9BU20 258 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 C12orf49Q9H741 205 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 SDF2L1Q9HCN8 221 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 GSN-AS1Q9NRJ2 163 aa11.52□□□□□ -0.57
COL6A3-207ENST00000433762 H3BP45 60 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 IFNL4K9M1U5 179 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 NXPH3O95157 252 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 OPN1MWP04001 364 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 OPN1MW2P0DN77 364 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 OPN1MW3P0DN78 364 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 SLC38A11Q08AI6 406 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 PLA2G2CQ5R387 149 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 TRAT1Q6PIZ9 186 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 SLC16A13Q7RTY0 426 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 C1orf87Q8N0U7 546 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 NIT2Q9NQR4 276 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
COL6A3-207ENST00000433762 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms