RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 TCHHQ07283 1943 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 WDR90Q96KV7 1748 aa3.44□□□□□ -1.86
USP54-206ENST00000433394 DOCK1Q14185 1865 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 COL4A5P29400 1685 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 UTRNP46939 3433 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 SIPA1L1O43166 1804 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ATAD5Q96QE3 1844 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 IGHV3OR16-8A0A075B7F1 116 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 IGKV1-6A0A0C4DH72 117 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 SULT1C2O00338 296 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 IGLV3-19P01714 112 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 APOEP02649 317 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 SLC2A1P11166 492 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ZNF14P17017 642 aaPredicted RBP3.43□□□□□ -1.86
USP54-206ENST00000433394 RAP1GDS1P52306 607 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 HBG1P69891 147 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 HBG2P69892 147 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ELF3P78545 371 aaPredicted RBP3.43□□□□□ -1.86
USP54-206ENST00000433394 FLI1Q01543 452 aaPredicted RBP3.43□□□□□ -1.86
USP54-206ENST00000433394 CD164Q04900 197 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 MEF2CQ06413 473 aaPredicted RBP3.43□□□□□ -1.86
USP54-206ENST00000433394 CEACAM21Q3KPI0 293 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 Q499Y3 187 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ZFAND6Q6FIF0 208 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 GALNT10Q86SR1 603 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ATP6V1C2Q8NEY4 427 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 TMA16Q96EY4 203 aaKnown RBP3.43□□□□□ -1.86
USP54-206ENST00000433394 PEBP4Q96S96 227 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 SEC22CQ9BRL7 303 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ING2Q9H160 280 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 ASB7Q9H672 318 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 MAT2BQ9NZL9 334 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 POFUT2Q9Y2G5 429 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 BAZ2BQ9UIF8 2168 aaKnown RBP3.43□□□□□ -1.86
USP54-206ENST00000433394 ABCB11O95342 1321 aa3.43□□□□□ -1.86
USP54-206ENST00000433394 PGPA6NDG6 321 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 CLDN34H7C241 214 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 ENTPD6O75354 484 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 NSA2O95478 260 aaKnown RBP3.42□□□□□ -1.86
USP54-206ENST00000433394 RAB4BP61018 213 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 REEP5Q00765 189 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 GOLGA7BQ2TAP0 167 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 LAMTOR1Q6IAA8 161 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 C16orf47Q6ZP98 133 aaPredicted RBP3.42□□□□□ -1.86
USP54-206ENST00000433394 ZNF680Q8NEM1 530 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 OR7G1Q8NGA0 311 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 OR8J2Q8NGG1 315 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 CCDC127Q96BQ5 260 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 BIRC8Q96P09 236 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 C6orf62Q9GZU0 229 aaPredicted RBP3.42□□□□□ -1.86
USP54-206ENST00000433394 SND1-IT1Q9HBX3 110 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 PUS1Q9Y606 427 aaKnown RBP eCLIP3.42□□□□□ -1.86
USP54-206ENST00000433394 ADAMTSL1Q8N6G6 1762 aa3.42□□□□□ -1.86
USP54-206ENST00000433394 PAPPA2Q9BXP8 1791 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 VPS37CA5D8V6 355 aaPredicted RBP3.41□□□□□ -1.86
USP54-206ENST00000433394 IZUMO1RA6ND01 250 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 ARGFXA6NJG6 315 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 A8MUU9 505 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 H0YJX3 145 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 K7ERS5 55 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 PGRMC1O00264 195 aaKnown RBP3.41□□□□□ -1.86
USP54-206ENST00000433394 GPR171O14626 319 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 RTL8CO15255 209 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 COCHO43405 550 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 SMIM24O75264 130 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 CNMDO75829 334 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 KCNK2O95069 426 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 ASS1P00966 412 aaKnown RBP3.41□□□□□ -1.86
USP54-206ENST00000433394 SOD3P08294 240 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 AKR1C4P17516 323 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 ATF1P18846 271 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 CDKN2CP42773 168 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 LGALS7P47929 136 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 CDC34P49427 236 aaPredicted RBP3.41□□□□□ -1.86
USP54-206ENST00000433394 ZNF83P51522 516 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 PRKCDQ05655 676 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 BAXQ07812 192 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 SPCS2Q15005 226 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 TMEM249Q2WGJ8 235 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 Q6ZT83 130 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 CCDC121Q6ZUS5 278 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 PRNTQ86SH4 94 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 ZNF738Q8NE65 137 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 ZNF555Q8NEP9 628 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 PHF10Q8WUB8 498 aaKnown RBP3.41□□□□□ -1.86
USP54-206ENST00000433394 RAD51AP1Q96B01 352 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 OTUB2Q96DC9 234 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 FMC1Q96HJ9 113 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 SUCNR1Q9BXA5 334 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 EURLQ9NYK6 297 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 TAS2R7Q9NYW3 318 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 COMMD9Q9P000 198 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 ENPP5Q9UJA9 477 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 TRPM7Q96QT4 1865 aa3.41□□□□□ -1.86
USP54-206ENST00000433394 PTPRFP10586 1907 aa3.4□□□□□ -1.86
USP54-206ENST00000433394 LOXHD1Q8IVV2 1947 aa3.4□□□□□ -1.86
USP54-206ENST00000433394 LOC105371267A0A1B0GV96 52 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 LEUTXA8MZ59 168 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 E5RI56 91 aa3.4□□□□□ -1.87
USP54-206ENST00000433394 CDIPTO14735 213 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms