RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 PRR18Q8N4B5 295 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 OR10V1Q8NGI7 309 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 SETD6Q8TBK2 473 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
USP40-205ENST00000430158 GCDHQ92947 438 aaPredicted RBP10.02□□□□□ -0.81
USP40-205ENST00000430158 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 OR1A1Q9P1Q5 309 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 ADAM30Q9UKF2 790 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 A3GALT2U3KPV4 340 aa10.02□□□□□ -0.81
USP40-205ENST00000430158 TRBV6-7A0A0A0MS04 114 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 CCDC160A6NGH7 325 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 ITGB1BP1O14713 200 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 IGHV4-59P01825 116 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 NAT1P18440 290 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 KIR2DS4P43632 304 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 GNG10P50151 68 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 DYNLT3P51808 116 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 LGALS4P56470 323 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 GNG2P59768 71 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 KIR2DS1Q14954 304 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 SSX2Q16385 188 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 TPTE2P1Q5T6R2 138 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 TMEM86BQ8N661 226 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 GVQW1Q8N7I0 195 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 GPX8Q8TED1 209 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 SNAPC3Q92966 411 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 PHF21AQ96BD5 680 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 ABHD1Q96SE0 405 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 ST6GALNAC5Q9BVH7 336 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 IFI27L2Q9H2X8 130 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 GNG12Q9UBI6 72 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 FAM96BQ9Y3D0 163 aa10.01□□□□□ -0.81
USP40-205ENST00000430158 A0A1W2PPI3 338 aa10□□□□□ -0.81
USP40-205ENST00000430158 LEUTXA8MZ59 168 aa10□□□□□ -0.81
USP40-205ENST00000430158 TOR1AO14656 332 aa10□□□□□ -0.81
USP40-205ENST00000430158 HOXA3O43365 443 aaPredicted RBP10□□□□□ -0.81
USP40-205ENST00000430158 PROP1O75360 226 aa10□□□□□ -0.81
USP40-205ENST00000430158 TALDO1P37837 337 aa10□□□□□ -0.81
USP40-205ENST00000430158 UBA52P62987 128 aaKnown RBP10□□□□□ -0.81
USP40-205ENST00000430158 BAMBIQ13145 260 aa10□□□□□ -0.81
USP40-205ENST00000430158 FBLN7Q53RD9 439 aa10□□□□□ -0.81
USP40-205ENST00000430158 CNIH2Q6PI25 160 aa10□□□□□ -0.81
USP40-205ENST00000430158 MCFD2Q8NI22 146 aa10□□□□□ -0.81
USP40-205ENST00000430158 SSMEM1Q8WWF3 244 aa10□□□□□ -0.81
USP40-205ENST00000430158 IL1F10Q8WWZ1 152 aa10□□□□□ -0.81
USP40-205ENST00000430158 ZNF251Q9BRH9 671 aa10□□□□□ -0.81
USP40-205ENST00000430158 DCUN1D5Q9BTE7 237 aa10□□□□□ -0.81
USP40-205ENST00000430158 C11orf54Q9H0W9 315 aaPredicted RBP10□□□□□ -0.81
USP40-205ENST00000430158 EXTL2Q9UBQ6 330 aa10□□□□□ -0.81
USP40-205ENST00000430158 POMT1Q9Y6A1 747 aa10□□□□□ -0.81
USP40-205ENST00000430158 PLXNB1O43157 2135 aa10□□□□□ -0.81
USP40-205ENST00000430158 FAM90A9PA6NNJ1 464 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 OOSP1A8MZH6 123 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 RNASE1P07998 156 aaKnown RBP9.99□□□□□ -0.81
USP40-205ENST00000430158 ZBTB25P24278 435 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 TNFSF8P32971 234 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 CEACAM6P40199 344 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 MRPS15P82914 257 aaKnown RBP9.99□□□□□ -0.81
USP40-205ENST00000430158 ZNF816Q0VGE8 651 aaPredicted RBP9.99□□□□□ -0.81
USP40-205ENST00000430158 MADCAM1Q13477 382 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 HABP2Q14520 560 aaPredicted RBP9.99□□□□□ -0.81
USP40-205ENST00000430158 LRRC75BQ2VPJ9 315 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 KRTAP21-3Q3LHN1 58 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 CCBE1Q6UXH8 406 aaPredicted RBP9.99□□□□□ -0.81
USP40-205ENST00000430158 LYSMD2Q8IV50 215 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 H1FOOQ8IZA3 346 aaPredicted RBP9.99□□□□□ -0.81
USP40-205ENST00000430158 CFHR4Q92496 578 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 CREB3L1Q96BA8 519 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 DUX5Q96PT3 197 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 SSX3Q99909 188 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 ABHD14AQ9BUJ0 271 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 CHIAQ9BZP6 476 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 MMP27Q9H306 513 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 SLC23A1Q9UHI7 598 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 ANXA10Q9UJ72 324 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 HILPDAQ9Y5L2 63 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 TNCP24821 2201 aa9.99□□□□□ -0.81
USP40-205ENST00000430158 FAM25AB3EWG3 89 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 FAM25CB3EWG5 89 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 FAM25GB3EWG6 89 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 SULT1C2O00338 296 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 TUSC2O75896 110 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 RGS11O94810 467 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 PRSS3P35030 304 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 CBX5P45973 191 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 RAB13P51153 203 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 KRTAP24-1Q3LI83 254 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 RBMS3Q6XE24 437 aaKnown RBP9.98□□□□□ -0.81
USP40-205ENST00000430158 SNX29P2Q8IUI4 249 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 BEST4Q8NFU0 473 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 ZFAND2BQ8WV99 257 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 JMJD8Q96S16 334 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 C6orf62Q9GZU0 229 aaPredicted RBP9.98□□□□□ -0.81
USP40-205ENST00000430158 SCPEP1Q9HB40 452 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 RDH8Q9NYR8 311 aa9.98□□□□□ -0.81
USP40-205ENST00000430158 MRPS7Q9Y2R9 242 aaKnown RBP9.98□□□□□ -0.81
USP40-205ENST00000430158 AMMECR1Q9Y4X0 333 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms