RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SULT1A1P50225 295 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 PPT1P50897 306 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 FABP6P51161 128 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 RTP5Q14D33 572 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 TRAT1Q6PIZ9 186 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 DPPA3Q6W0C5 159 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 Q6ZR03 302 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 ZNF826PQ6ZT77 177 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 DRAM1Q8N682 238 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 TMEM171Q8WVE6 324 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 EIF5A2Q9GZV4 153 aaKnown RBP11.52□□□□□ -0.57
THBS3-202ENST00000428962 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 SLC25A15Q9Y619 301 aa11.52□□□□□ -0.57
THBS3-202ENST00000428962 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 TXNL1O43396 289 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 C1QL1O75973 258 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 F12P00748 615 aaPredicted RBP11.51□□□□□ -0.57
THBS3-202ENST00000428962 IFNA5P01569 189 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 IGKV1-39P01597 117 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 IGKV1D-39P04432 117 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 GABRA2P47869 451 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 PAX9P55771 341 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 CATR1Q13166 79 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 TMEM217Q8N7C4 229 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
THBS3-202ENST00000428962 SMDT1Q9H4I9 107 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 FAM90A26D6RGX4 464 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 H7C2Y5 167 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 SYNGR2O43760 224 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 FHITP49789 147 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 TAS2R30P59541 319 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 FLI1Q01543 452 aaPredicted RBP11.51□□□□□ -0.57
THBS3-202ENST00000428962 C3orf36Q3SXR2 165 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 CBLN2Q8IUK8 224 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 ODF3L1Q8IXM7 274 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 OR1L1Q8NH94 360 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 UBALD1Q8TB05 177 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 COA4Q9NYJ1 87 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 FZR1Q9UM11 496 aa11.51□□□□□ -0.57
THBS3-202ENST00000428962 KIAA1324LA8MWY0 1029 aaPredicted RBP11.5□□□□□ -0.57
THBS3-202ENST00000428962 C9JQL5 133 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 IGKV1-5P01602 117 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 HBZP02008 142 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 CRYABP02511 175 aaKnown RBP11.5□□□□□ -0.57
THBS3-202ENST00000428962 RAB2AP61019 212 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 PAX5Q02548 391 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 AESQ08117 197 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 ZNF585BQ52M93 769 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 KRBOX4Q5JUW0 171 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 TIMM23BQ5SRD1 257 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 SLC25A24Q6NUK1 477 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 UNQ6494/PRO21346Q6UXR6 183 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 Q6ZS92 163 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 SEM1Q6ZVN7 128 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 TCTEX1D1Q8N7M0 179 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 COQ2Q96H96 371 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 LURAP1Q96LR2 239 aa11.5□□□□□ -0.57
THBS3-202ENST00000428962 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
THBS3-202ENST00000428962 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
THBS3-202ENST00000428962 HBG1P69891 147 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 HBG2P69892 147 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 COL10A1Q03692 680 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 HFEQ30201 348 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 C1orf185Q5T7R7 199 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 OR10Z1Q8NGY1 313 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 PSENENQ9NZ42 101 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 MMP24Q9Y5R2 645 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 ATP6V1G2-DDX39BF2Z307 99 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 C1QTNF9P0C862 333 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 TLE4Q04727 773 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 Q6ZRM9 215 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 OR2Z1Q8NG97 314 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 PPP1R35Q8TAP8 253 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 MRGPRDQ8TDS7 321 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 FAM216AQ8WUB2 273 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 SCRT1Q9BWW7 348 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 SLC35B3Q9H1N7 401 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 SEBOXQ9HB31 216 aaPredicted RBP11.49□□□□□ -0.57
THBS3-202ENST00000428962 SMCO4Q9NRQ5 59 aa11.49□□□□□ -0.57
THBS3-202ENST00000428962 ACACBO00763 2458 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 TMEM8BA6NDV4 472 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 H3BP45 60 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 SPINT2O43291 252 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 HBE1P02100 147 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 PPP1CCP36873 323 aaKnown RBP11.48□□□□□ -0.57
THBS3-202ENST00000428962 TMEM267Q0VDI3 215 aaPredicted RBP11.48□□□□□ -0.57
THBS3-202ENST00000428962 OR52L2PQ8NGH6 319 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 SCGB1C1Q8TD33 95 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 MUCL1Q96DR8 90 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 KCNJ16Q9NPI9 418 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
THBS3-202ENST00000428962 LAMP3Q9UQV4 416 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms